Job Description A0AVK6 Confidence 67.73% Date Fri May 25 10:06:19 BST 2012 Rank 71 Aligned Residues 68 % Identity 12% Template d2coha1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain CAP C-terminal domain-like Resolution 1.50

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		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.					.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.
Query SS confidence																								.	.	.	.
Query Sequence		L	C	H	K	F	L	A	R	Y	P	N	Y	P	N	P	A	V	N	N	D	I	C	.	.	.	.	L	D	E	V	A	E	E	L	N	V	E	R	R	R	I	Y	D	I	V	N	V	L	E	S	L	H	M	V	S	R	L	A	K	N	R	Y	T	W	H	G	R	H	N	L	N	K	T
Query Conservation																								.	.	.	.
Alig confidence																								.	.	.	.																														.
Template Conservation																																																									.
Template Sequence		X	A	A	A	L	L	E	L	S	E	T	P	L	A	H	E	E	E	G	K	V	V	L	K	A	T	H	D	E	L	A	A	A	V	G	S	V	R	E	T	V	T	K	V	I	G	E	L	A	R	E	G	Y	I	R	.	S	G	Y	G	K	I	Q	L	L	D	L	K	G	L	K	E	L
Template Known Secondary structure										T	T	S	T	T					T	T																T																T	T	S			.			T	T					S
Template Predicted Secondary structure																																																									.
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions