Job Description A0AVK6 Confidence 64.66% Date Fri May 25 10:06:19 BST 2012 Rank 81 Aligned Residues 77 % Identity 16% Template d2bgca1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain CAP C-terminal domain-like Resolution 2.3

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		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.					.	.	.	.	.	.	.	140			.	.	.	.	.	.	.	.	.	150	.	.		.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure																	.	.	.	.									.	.													.
Query SS confidence																	.	.	.	.									.	.													.
Query Sequence		L	G	L	L	C	H	K	F	L	A	R	Y	P	N	Y	.	.	.	.	P	N	P	A	V	N	N	D	.	.	I	C	L	D	E	V	A	E	E	L	N	V	.	E	R	R	R	I	Y	D	I	V	N	V	L	E	S	L	H	M	V	S	R	L	A	K	N	R	Y	T	W	H	G	R	H	N	L	N	K	T	L
Query Conservation																	.	.	.	.									.	.													.
Alig confidence																	.	.	.	.									.	.													.																			.
Template Conservation																																																														.
Template Sequence		L	G	S	I	C	S	Q	L	L	I	L	T	Y	V	Y	G	K	E	T	P	D	G	I	K	I	T	L	D	N	L	T	M	Q	E	L	G	Y	S	S	G	I	A	H	S	S	A	V	S	R	I	I	S	K	L	K	Q	E	K	V	I	.	V	Y	K	N	S	C	F	Y	V	Q	N	L	D	Y	L	K	R	Y	A
Template Known Secondary structure																					T	T							S											T	T																	T	T	S		.				T	T					S
Template Predicted Secondary structure																																																														.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		191	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	L	K	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	K	L	D	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		219	220	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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