 |
| Job Description | A0AVK6 | | Confidence | 82.72% | Date | Fri May 25 10:06:19 BST 2012 |
| Rank | 29 | Aligned Residues | 45 |
| % Identity | 9% | Template | d1wi9a_ |
| SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| PCI domain (PINT motif)
|
| Resolution | UNK |
|
|   |   |
121 | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
L | C | H | K | F | L | A | R | Y | P | N | Y | P | N | P | A | V | N | N | D | I | C | L | D | E | V | A | E | E | L | N | V | E | R | R | R | I | Y | D | I | V | N | V | L | E | S | L | H | M | V | S |
| Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|
|   |   |
|
|   |   |
| . | . | . | . | . | . |
|   |   |
|
|
|   |
|
|
|
|
|   |   |
|   |
|   |
|
|
|   |
|   |
|
|
|   |
|
|   |   |
|   |
|
|
| Template Sequence |   |
F | L | T | E | F | I | N | Y | I | . |
. |
. |
. |
. |
. |
K | K | S | K | V | V | L | L | E | D | L | A | F | Q | M | G | L | R | T | Q | D | A | I | N | R | I | Q | D | L | L | T | E | G | T | L | T |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |
| S |  |  |
|  |  |  |  |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S | S |
|
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
105 | . | . | . | . | 110 | . | . | . | |
|
|
|
|
|
. | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|