Return to main results Retrieve Phyre Job Id

Job DescriptionA0AVK6
Confidence61.80%DateFri May 25 10:06:19 BST 2012
Rank93Aligned Residues44
% Identity11%Templated1p4xa1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   125....130.........140.........150.........160.........170...
Predicted Secondary structure 















Query SS confidence 
















































Query Sequence  FLARYPNYPNPAVNNDICLDEVAEELNVERRRIYDIVNVLESLHMVSRL
Query Conservation                                                   
Alig confidence 




.....






































Template Conservation 
  
 .....       
  


  
      

  
  

  
 
 
 
Template Sequence  LTYLF. . . . . HQQENTLPFKKIVSDLCYKQSDLVQHIKVLVKHSYISKV
Template Known Secondary structure  .....S
S
SSSS
GGGTTTS
Template Predicted Secondary structure  .....













Template SS confidence 
















































   40.... .....50.........60.........70.........80...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions