Return to main results Retrieve Phyre Job Id

Job DescriptionA0AVK6
Confidence34.94%DateFri May 25 10:06:19 BST 2012
Rank229Aligned Residues43
% Identity12%Templated1jt6a1
SCOP infoDNA/RNA-binding 3-helical bundle Homeodomain-like Tetracyclin repressor-like, N-terminal domain
Resolution2.54

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   121........130.........140.........150.........160.......
Predicted Secondary structure 















Query SS confidence 














































Query Sequence  LCHKFLARYPNYPNPAVNNDICLDEVAEELNVERRRIYDIVNVLESL
Query Conservation                                                 
Alig confidence 








....

































Template Conservation 

 

  
 ....   
    
   

  



  
 
 

  
  
Template Sequence  ILGVAKELF. . . . IKNGYNATTTGEIVKLSESSKGNLYYHFKTKENL
Template Known Secondary structure  ....
TTT

TT

SS
Template Predicted Secondary structure  ....













Template SS confidence 














































   7..10..... ....20.........30.........40.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions