Return to main results Retrieve Phyre Job Id

Job DescriptionA0AVK6
Confidence37.77%DateFri May 25 10:06:19 BST 2012
Rank211Aligned Residues42
% Identity21%Templated1in4a1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Helicase DNA-binding domain
Resolution1.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   116...120...... ...130.........140.........150.........160.
Predicted Secondary structure  .















Query SS confidence 










.


































Query Sequence  KSLGLLCHKFL. ARYPNYPNPAVNNDICLDEVAEELNVERRRIYDIV
Query Conservation             .                                   
Alig confidence 










.









....




















Template Conservation   


  
  

  

  
 


....


 


  
 
   


  
Template Sequence  EGLDEFDRKILKTIIEIYRGGP. . . . VGLNALAASLGVEADTLSEVY
Template Known Secondary structure 



STT

....B
TS
T
Template Predicted Secondary structure 







....


Template SS confidence 














































   255....260.........270...... ...280.........290.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions