Job Description A0AVK6 Confidence 93.47% Date Fri May 25 10:06:19 BST 2012 Rank 5 Aligned Residues 82 % Identity 12% Template c3r4kD_ PDB info PDB header:dna binding protein Chain: D: PDB Molecule:transcriptional regulator, iclr family; PDBTitle: crystal structure of a putative iclr transcriptional regulator2 (tm1040_3717) from silicibacter sp. tm1040 at 2.46 a resolution Resolution 2.46 Å

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		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	F	L	A	R	Y	P	N	Y	P	N	P	A	V	N	N	D	I	C	L	D	E	V	A	E	E	L	N	V	E	R	R	R	I	Y	D	I	V	N	V	L	E	S	L	H	M	V	S	R	L	A	K	N	R	Y	T	W	H	G	R	H	N	L	N	K	T	L	G	T	L	K	S	I	G	E	E	N	K	Y	A
Query Conservation
Alig confidence								.	.	.	.	.																																							.							.
Template Conservation								.	.	.	.	.																																							.							.
Template Sequence		T	L	L	T	Y	F	.	.	.	.	.	N	H	G	R	L	E	I	G	L	S	D	L	T	R	L	S	G	X	N	K	A	T	V	Y	R	L	X	S	E	L	Q	E	A	G	F	V	E	Q	.	V	E	R	S	Y	R	.	L	G	P	Q	V	L	R	L	A	A	L	R	E	A	S	V	P	I	L	S	A	S	R
Template Known Secondary structure					T	T		.	.	.	.	.	B	T	T	B	S													S															T	T	S				.							.			T	T												S
Template Predicted Secondary structure								.	.	.	.	.																																							.							.
Template SS confidence
		9	10	.	.	.	.						.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		204	.	.	.	.	.	210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	I	M	M	I	K	K	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	V	L	R	E	L	S	E	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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