Return to main results Retrieve Phyre Job Id

Job DescriptionA0AVK6
Confidence77.01%DateFri May 25 10:06:19 BST 2012
Rank45Aligned Residues43
% Identity12%Templatec3majA_
PDB info PDB header:dna binding proteinChain: A: PDB Molecule:dna processing chain a; PDBTitle: crystal structure of putative dna processing protein dpra from2 rhodopseudomonas palustris cga009
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   137..140.........150.........160.........170.........
Predicted Secondary structure 











Query SS confidence 










































Query Sequence  VNNDICLDEVAEELNVERRRIYDIVNVLESLHMVSRLAKNRYT
Query Conservation                                             
Alig confidence 










































Template Conservation         
 
     
        
  


 
 
    
  
 
Template Sequence  GPSPVGIDDLIRLSGISPAVVRTILLELELAGRLERHGGSLVS
Template Known Secondary structure 
SS



TT


TTS
Template Predicted Secondary structure 












Template SS confidence 










































   336...340.........350.........360.........370........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions