Job Description A0AVK6 Confidence 56.02% Date Fri May 25 10:06:19 BST 2012 Rank 122 Aligned Residues 62 % Identity 10% Template c3gbgA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:tcp pilus virulence regulatory protein; PDBTitle: crystal structure of toxt from vibrio cholerae o395 Resolution 1.90 Å

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		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	C	H	K	F	L	A	R	Y	P	N	Y	P	N	P	A	V	N	N	D	I	C	L	D	E	V	A	E	E	L	N	V	E	R	R	R	I	Y	D	I	V	N	V	L	E	S	L	H	M	V	S	R	L	A	K	N	R	Y	T	W	H	G	R	H	N	L	N	K	T	L	G	T	L	K	S
Query Conservation
Alig confidence											.	.	.	.																														.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.																														.	.	.	.	.	.	.	.	.
Template Sequence		A	M	E	K	I	S	C	L	V	.	.	.	.	K	S	D	I	T	R	N	W	R	W	A	D	I	C	G	E	L	R	T	N	R	M	I	L	K	K	E	L	E	.	.	.	.	.	.	.	.	.	S	R	G	V	K	F	R	E	L	I	N	S	I	R	I	S	Y	S	I	S	L	M	K	T
Template Known Secondary structure											.	.	.	.			T	T	T	S												T												.	.	.	.	.	.	.	.	.	T	T	T
Template Predicted Secondary structure											.	.	.	.																														.	.	.	.	.	.	.	.	.
Template SS confidence
		170	.	.	.	.	.	.	.	.					.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.										.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions