 |
| Job Description | A0AVK6 | | Confidence | 72.15% | Date | Fri May 25 10:06:19 BST 2012 |
| Rank | 60 | Aligned Residues | 52 |
| % Identity | 6% | Template | c3eqxB_ |
| PDB info |
PDB header:dna binding protein | Chain: B: PDB Molecule:fic domain containing transcriptional regulator; |
PDBTitle: crystal structure of a fic family protein (so_4266) from shewanella2 oneidensis at 1.6 a resolution
|
| Resolution | 1.60 Å |
|
 |
|   |   |
141 | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
I | C | L | D | E | V | A | E | E | L | N | V | E | R | R | R | I | Y | D | I | V | N | V | L | E | S | L | H | M | V | S | R | L | A | K | N | R | Y | T | W | H | G | R | H | N | L | N | K | T | L | G | T |
| Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |
|   |   |
|   |   |   |
|   |
|   |   |   |   |   |
|
|   |   |   |
|   |   |   |   |   |
|   |
|   |   |   |
| Template Sequence |   |
C | R | I | Q | N | L | V | E | S | G | L | A | K | R | Q | T | A | S | V | Y | L | K | Q | L | C | D | I | G | V | L | E | E | V | Q | S | G | K | E | K | L | F | V | H | P | K | F | V | T | L | X | T | K |
| Template Known Secondary structure |   |
 |
|  |  |  |  |  |  | T | T | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
|  |  |  |  |  | T | T |  |  |  |  |  |
|  |  |  |  |  |  |  |  | S |
| Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
311 | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|