Job Description A0AVK6 Confidence 28.93% Date Fri May 25 10:06:19 BST 2012 Rank 267 Aligned Residues 41 % Identity 22% Template c3dluA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:signal recognition particle 19 kda protein; PDBTitle: structures of srp54 and srp19, the two proteins assembling2 the ribonucleic core of the signal recognition particle3 from the archaeon pyrococcus furiosus. Resolution 1.80 Å

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		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Y	P	N	Y	P	N	P	A	V	N	N	D	I	C	L	D	E	V	A	E	E	L	N	V	E	R	R	R	I	Y	D	I	V	N	V	L	E	S	L	H	M
Query Conservation
Alig confidence																	.
Template Conservation																	.
Template Sequence		V	W	P	S	E	L	D	S	R	L	S	R	K	Y	G	.	R	I	V	P	R	S	I	A	V	E	S	P	R	V	E	E	I	V	R	A	A	E	E	L	K	F
Template Known Secondary structure				G	G	G	G	B	T	T	S		G	G	G	T	.			S		T	T	T	S	B	S	S													T	T
Template Predicted Secondary structure																	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20		.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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