 |
| Job Description | A0AVK6 | | Confidence | 55.00% | Date | Fri May 25 10:06:19 BST 2012 |
| Rank | 126 | Aligned Residues | 42 |
| % Identity | 19% | Template | c2raeA_ |
| PDB info |
PDB header:transcription | Chain: A: PDB Molecule:transcriptional regulator, acrr family protein; |
PDBTitle: crystal structure of a tetr/acrr family transcriptional regulator from2 rhodococcus sp. rha1
|
| Resolution | 2.20 Å |
|
|   |   |
113 | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
R | K | E | K | S | L | G | L | L | C | H | K | F | L | A | R | Y | P | N | Y | P | N | P | A | V | N | N | D | I | C | L | D | E | V | A | E | E | L | N | V | E | R | R | R | I | Y |
| Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |   |   |
|
|   |   |
|
|   |
|
|   |   |
|   | . | . | . | . |   |   |   |
|   |   |   |   |
|
|   |   |
|
|   |   |
|
|
|
|   |   |
|   |
|
| Template Sequence |   |
R | P | S | T | T | Q | D | R | I | S | T | V | G | I | E | L | F | . |
. |
. |
. |
T | E | Q | G | F | D | A | T | S | V | D | E | V | A | E | A | S | G | I | A | R | R | T | L | F |
| Template Known Secondary structure |   |
S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |
| T | T | T | S |
|  |  |  |  |  |  |  | T | T | S |
|  |  |  |  |  |
| Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
14 | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | |
|
|
|
. | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|