Job Description A0AVK6 Confidence 46.57% Date Fri May 25 10:06:19 BST 2012 Rank 163 Aligned Residues 74 % Identity 15% Template c1wsuA_ PDB info PDB header:translation/rna Chain: A: PDB Molecule:selenocysteine-specific elongation factor; PDBTitle: c-terminal domain of elongation factor selb complexed with2 secis rna Resolution 2.30 Å

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		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.
Query SS confidence																																																										.
Query Sequence		L	C	H	K	F	L	A	R	Y	P	N	Y	P	N	P	A	V	N	N	D	I	C	L	D	E	V	A	E	E	L	N	V	E	R	R	R	I	Y	D	I	V	N	V	L	E	S	L	H	M	V	S	R	L	A	K	N	.	R	Y	T	W	H	G	R	H	N	L	N	K	T	L	G	T	L	K	S	I	G	E
Query Conservation																																																										.
Alig confidence											.	.	.	.																																												.
Template Conservation											.	.	.	.
Template Sequence		L	L	K	D	L	E	D	K	Y	.	.	.	.	R	V	S	R	W	Q	P	P	S	F	K	E	V	A	G	S	F	N	L	D	P	S	E	L	E	E	L	L	H	Y	L	V	R	E	G	V	L	V	K	I	N	D	E	F	Y	W	H	R	Q	A	L	G	E	A	R	E	V	I	K	N	L	A	S	T	G	P
Template Known Secondary structure											.	.	.	.				T	T	S			B									T																T	T	S					S	S	S	B																		G	G	G	S
Template Predicted Secondary structure											.	.	.	.
Template SS confidence
		518	.	520	.	.	.	.	.	.					.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions