Return to main results Retrieve Phyre Job Id

Job DescriptionA0AVK6
Confidence45.52%DateFri May 25 10:06:19 BST 2012
Rank170Aligned Residues21
% Identity33%Templatec1umqA_
PDB info PDB header:dna-binding proteinChain: A: PDB Molecule:photosynthetic apparatus regulatory protein; PDBTitle: solution structure and dna binding of the effector domain2 from the global regulator prra(rega) from r. sphaeroides:3 insights into dna binding specificity
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   142.......150.........160..
Predicted Secondary structure 




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Query Sequence  CLDEVAEELNVERRRIYDIVN
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Template Conservation 
   

  




 

 



Template Sequence  NVSETARRLNMHRRTLQRILA
Template Known Secondary structure 
TS
Template Predicted Secondary structure 



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   56...60.........70......
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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