Job Description A0AVK6 Confidence 32.08% Date Fri May 25 10:06:19 BST 2012 Rank 247 Aligned Residues 66 % Identity 15% Template c1hlvA_ PDB info PDB header:dna binding protein/dna Chain: A: PDB Molecule:major centromere autoantigen b; PDBTitle: crystal structure of cenp-b(1-129) complexed with the cenp-2 b box dna Resolution 2.50 Å

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		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	S	R	K	E	K	S	L	G	L	L	C	H	K	F	L	A	R	Y	P	N	Y	P	N	P	A	V	N	N	D	I	C	L	D	E	V	A	E	E	L	N	V	E	R	R	R	I	Y	D	I	V	N	V	L	E	S	L	H	M	V	S	R	L	A	K	N	R	Y	T	W	H	G	R
Query Conservation
Alig confidence															.						.	.	.	.	.	.
Template Conservation															.						.	.	.	.	.	.
Template Sequence		P	K	R	R	Q	L	T	F	R	E	K	S	R	.	I	I	Q	E	V	.	.	.	.	.	.	E	E	N	P	D	L	R	K	G	E	I	A	R	R	F	N	I	P	P	S	T	L	S	T	I	L	K	N	K	R	A	I	L	A	S	E	R	K	Y	G	V	A	S	T	C	R	K	T
Template Known Secondary structure			S	S											.						.	.	.	.	.	.				T	T	S										T												T												G	G	G	G	G	T
Template Predicted Secondary structure															.						.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.		.	.	.	.	20							.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions