4 c3ps5A_ Probab=100.00  E-value=3.1e-39  Score=294.45  Aligned_columns=198  Identities=29%

Q ss_pred             CCCCCCCHHHHHHHHHCC-CCCCEEEECCCCCCCCCEEEEEEECCEEEEEEEEECCCEEEECCCCCCCCHHHHHHHHHHC
Q ss_conf             836789989999986158-9983886336777786079999989975668999619848844877558989999988301
Q batch____        65 WYWGDISREEVNDKLRDM-PDGTFLVRDASTKMQGDYTLTLRKGGNNKLIKIYHRDGKYGFSDPLTFNSVVELINHYHHE  143 (461)
Q Consensus        65 wy~g~~~r~~a~~~l~~~-~dG~flvR~s~~~~~~~~~ls~~~~~~~~h~~i~~~~~~~~~~~~~~f~s~~~li~~~~~~  143 (461)
                      ||||+|+|++||.+|+.. +||+||||+ |.+.+|.|+||++.++++.||+|...++.|++..+..|+||.+||+||+..
T Consensus         4 wfhg~i~r~~Ae~lL~~~~~dG~fLvR~-S~~~~g~~~LS~~~~~~v~H~~I~~~~~~y~l~~~~~f~sl~eLi~~y~~~   82 (529)
T c3ps5A_           4 WFHRDLSGLDAETLLKGRGVHGSFLARP-SRKNQGDFSLSVRVGDQVTHIRIQNSGDFYDLYGGEKFATLTELVEYYTQQ   82 (529)
T ss_dssp             CCCSSCCHHHHHHHHHHHCCTTCEEEEE-CSSSTTSEEEEEEETTEEEEEEEEECSSCEESSSSCCBSSHHHHHHHHHTT
T ss_pred             CCCCCCCHHHHHHHHHHCCCCCCEEEEE-CCCCCCCEEEEEEECCEEEEEEEEECCCEEEEECCCCCCCHHHHHHHHHHC
T ss_conf             3177789999999986248998499970-568888069999999958999998429879970888778989999998728


Q ss_pred             CCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             234555-6764444343322233322243417899999999999999999999999999999999999999999999999
Q batch____       144 SLAQYN-PKLDVKLMYPVSRYQQDQLVKEDNIDAVGKKLQEYHSQYQEKSKEYDRLYEEYTRTSQEIQMKRTAIEAFNET  222 (461)
Q Consensus       144 ~~~~~~-~~l~~~l~~P~~r~~q~~~~~~~~ie~L~~qL~el~~~~~~~~ke~e~L~~el~~l~~ele~~k~~le~l~e~  222 (461)
                      +..... .+..+.+.+|++.                                                            
T Consensus        83 ~~~l~~~~~~~~~l~~p~~~------------------------------------------------------------  102 (529)
T c3ps5A_          83 QGVLQDRDGTIIHLKYPLNC------------------------------------------------------------  102 (529)
T ss_dssp             SSCCBCSSCCBCCCCCBCCC------------------------------------------------------------
T ss_pred             CCCCCCCCCCCCCCCCCCCC------------------------------------------------------------
T ss_conf             45321224760224437677------------------------------------------------------------


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999999999999999999999899999999999999999999999999999999999999999999999999999
Q batch____       223 IKIFEEQCHTQEQHSKEYIERFRREGNEKEIERIMMNYDKLKSRLGEIHDSKMRLEQDLKNQALDNREIDKKMNSIKPDL  302 (461)
Q Consensus       223 lk~~~~ql~~l~~~l~~~~~~~~~~~~~~e~~~l~~~~e~lq~~l~~l~~~~~~l~~~l~~~~~~~~eLe~el~~Lk~el  302 (461)
                                                                                                      
T Consensus       103 --------------------------------------------------------------------------------  102 (529)
T c3ps5A_         103 --------------------------------------------------------------------------------  102 (529)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
T ss_conf             --------------------------------------------------------------------------------


Q ss_pred             HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC-CCEEE
Q ss_conf             99999999999998732355899998745531001344420013454433233212255689889999961489-97499
Q batch____       303 IQLRKIRDQHLVWLNHKGVRQKRLNVWLGIKNEDADENYFINEEDENLPHYDEKTWFVEDINRVQAEDLLYGKP-DGAFL  381 (461)
Q Consensus       303 ~~L~ke~e~~~~~L~~~~~~~~~L~~~L~~~~~~~~e~~~~~~~~~~~~~~~~~~w~~~~~~r~~a~~~l~~~~-~G~fl  381 (461)
                                                                      +.....+||||+|+|.+||.+|...+ +|+||
T Consensus       103 ------------------------------------------------~~~~~~~Wfhg~i~r~eAe~~L~~~~~dG~FL  134 (529)
T c3ps5A_         103 ------------------------------------------------SDPTSERWYHGHMSGGQAETLLQAKGEPWTFL  134 (529)
T ss_dssp             ------------------------------------------------CCSCCSTTEEESCCHHHHHHHHHHHCCTTEEE
T ss_pred             ------------------------------------------------CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEE
T ss_conf             ------------------------------------------------68665885345689889999997448878355


Q ss_pred             EEEC-CCCCCEEEEEEECC---------EEEEEEEEEECCCEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEECCC
Q ss_conf             8512-89985699999899---------7899999970895363257766897899999986188643357773112366
Q batch____       382 IRES-SKKGCYACSVVADG---------EVKHCVIYSTARGYGFAEPYNLYSSLKELVLHYQQTSLVQHNDSLNVRLAYP  451 (461)
Q Consensus       382 vR~s-~~~~~~~ls~~~~~---------~~~h~~i~~~~~~~~~~~~~~~~~sl~~li~~y~~~~l~~~~~~l~~~L~~p  451 (461)
                      ||.| +.+|.|+||++++|         +|+||+|.+..++| +++.+..|+||.+||+||++++++...+. .+.|+.|
T Consensus       135 VR~s~~~~g~y~LS~~~~~~~~~~~~~~~v~h~~i~~~~~~~-~i~~~~~F~sl~~Li~~y~~~p~v~~~g~-v~~Lr~~  212 (529)
T c3ps5A_         135 VRESLSQPGDFVLSVLSDQPKAGPGSPLRVTHIKVMCEGGRY-TVGGLETFDSLTDLVEHFKKTGIEEASGA-FVYLRQP  212 (529)
T ss_dssp             EEECSSSTTCEEEEEEEEEESSSTTSCEEEEEEEEBCGGGCB-BSSSSCCBSSHHHHHHHHHHSCBCCTTSC-CBCCCEE
T ss_pred             EEHHHCCCCCEEEEEEECCCCCCCCCCCEEEEEEEEEECCEE-EECCCCCCCCHHHHHHHHHHCCCCCCCCH-HHHHHHH
T ss_conf             500006788438999625864444565703699999608806-84598634878999999985696466775-6787753


Q ss_pred             CC
Q ss_conf             13
Q batch____       452 VH  453 (461)
Q Consensus       452 ~~  453 (461)
                      .+
T Consensus       213 ~~  214 (529)
T c3ps5A_         213 YY  214 (529)
T ss_dssp             CC
T ss_pred             CC
T ss_conf             05


