Job Description Q92569 Confidence 20.48% Date Fri May 25 09:38:24 BST 2012 Rank 247 Aligned Residues 91 % Identity 9% Template c3mkxC_ PDB info PDB header:antiviral protein Chain: C: PDB Molecule:bone marrow stromal antigen 2; PDBTitle: crystal structure of bst2/tetherin Resolution 2.60 Å

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		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	F	E	E	Q	C	H	T	Q	E	Q	H	S	K	E	Y	I	E	R	F	R	R	E	G	N	E	K	E	I	E	R	I	M	M	N	Y	D	K	L	K	S	R	L	G	E	I	H	D	S	K	M	R	L	E	Q	D	L	K	N	Q	A	L	D	N	R	E	I	D	K	K	M	N	S	I	K	P	D	L	I	Q
Query Conservation
Alig confidence																																						.
Template Conservation																																						.
Template Sequence		R	A	V	X	E	C	R	N	V	T	H	L	L	Q	Q	E	L	T	E	A	Q	K	G	F	Q	D	V	E	A	Q	A	A	T	C	N	H	.	T	V	X	A	L	X	A	S	L	D	A	E	K	A	Q	G	Q	K	K	V	E	E	L	E	G	E	I	T	T	L	N	H	K	L	Q	D	A	S	A	E	V	E	R
Template Known Secondary structure																																						.
Template Predicted Secondary structure																																						.
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		305	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	K	I	R	D	Q	H	L	V	W	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	R	R	E	N	Q	V	L	S	V	R	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions