Job Description Q92569 Confidence 99.67% Date Fri May 25 09:38:24 BST 2012 Rank 91 Aligned Residues 85 % Identity 26% Template c3gxxB_ PDB info PDB header:transcription Chain: B: PDB Molecule:transcription elongation factor spt6; PDBTitle: structure of the sh2 domain of the candida glabrata2 transcription elongation factor spt6, crystal form b Resolution 2.40 Å

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		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.		.	.	390	.	.	.	.	.	.	.		.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.			.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.
Predicted Secondary structure																																		.											.																		.	.
Query SS confidence																																		.											.																		.	.
Query Sequence		K	T	W	F	V	E	D	I	N	R	V	Q	A	E	D	L	L	Y	G	K	P	D	G	A	F	L	I	R	E	S	S	K	.	K	G	C	Y	A	C	S	V	V	A	.	D	G	E	V	K	H	C	V	I	Y	S	T	A	R	G	Y	G	.	.	F	A	E	P	Y	N	L	Y	S	S	L	K	E	L	V	L	H
Query Conservation																																		.											.																		.	.
Alig confidence							.																											.											.																		.	.
Template Conservation							.
Template Sequence		H	P	Y	Y	F	.	P	F	N	G	K	Q	A	E	D	Y	L	R	S	K	E	R	G	D	F	V	I	R	Q	S	S	R	G	D	D	H	L	A	I	T	W	K	L	D	K	D	L	F	Q	H	V	D	I	Q	E	X	E	K	E	X	G	K	V	L	V	V	E	G	Q	R	Y	H	D	L	D	Q	I	I	V	E
Template Known Secondary structure			T	T	B		.												T	T	S		T	T									S	T	T											T	T																				S	S	S				S	S
Template Predicted Secondary structure							.
Template SS confidence
		10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		432	.	.	.	.	.	.	.	440	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	Q	Q	T	S	L	V	Q	H	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	L	Q	N	K	I	R	L	L	N
Template Known Secondary structure									T
Template Predicted Secondary structure
Template SS confidence
		93	.	.	.	.	.	.	100	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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