Job Description Q92569 Confidence 22.17% Date Fri May 25 09:38:24 BST 2012 Rank 236 Aligned Residues 169 % Identity 9% Template c2yfaA_ PDB info PDB header:receptor Chain: A: PDB Molecule:methyl-accepting chemotaxis transducer; PDBTitle: x-ray structure of mcps ligand binding domain in complex with malate Resolution 1.80 Å

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		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.				230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure																																																									.	.	.
Query SS confidence																																																									.	.	.
Query Sequence		D	A	V	G	K	K	L	Q	E	Y	H	S	Q	Y	Q	E	K	S	K	E	Y	D	R	L	Y	E	E	Y	T	R	T	S	Q	E	I	Q	M	K	R	T	A	I	E	A	F	N	E	T	I	K	I	F	E	E	Q	.	.	.	C	H	T	Q	E	Q	H	S	K	E	Y	I	E	R	F	R	R	E	G	N	E	K
Query Conservation																																																									.	.	.
Alig confidence																																																									.	.	.
Template Conservation
Template Sequence		V	K	L	L	G	E	L	G	D	T	I	S	A	Y	K	L	S	L	N	K	M	R	Q	G	Y	D	A	T	R	A	A	R	V	S	M	D	S	S	A	I	R	A	D	Q	A	M	D	A	L	S	Q	E	V	M	A	R	P	E	A	D	S	V	R	L	A	Q	Y	Q	L	I	S	K	A	R	Q	Q	L	L	Q	V
Template Known Secondary structure																																																									S		S
Template Predicted Secondary structure
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	E	R	I	M	M	N	Y	D	K	L	K	S	R	L	G	E	I	H	D	S	K	M	R	L	E	Q	D	L	K	N	Q	A	L	D	N	R	E	I	D	K	K	M	N	S	I	K	P	D	L	I	Q	L	R	K	I	R	D	Q	H	L	V	W	L	N	H	K	G	V	R	Q	K	R	L	N	V	W	L	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	I	D	V	R	G	Y	I	A	E	N	S	S	A	N	E	Q	A	A	L	R	Q	L	D	A	A	L	A	D	T	D	N	L	K	R	Q	L	P	S	E	D	A	R	L	Q	Q	F	E	N	A	V	L	A	Y	R	D	A	V	R	Q	F	R	D	A	V	A	N	I	T	T	S	R	A	E	M	T	V	Q	G	A
Template Known Secondary structure											S																												G	G	G
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		332	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	K	N	E	D	A	D	E	N	Y	F	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	I	V	K	R	S	D	A	L	Y	Q	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions