Job Description Q92569 Confidence 95.85% Date Fri May 25 09:38:24 BST 2012 Rank 132 Aligned Residues 155 % Identity 9% Template c2v71A_ PDB info PDB header:nuclear protein Chain: A: PDB Molecule:nuclear distribution protein nude-like 1; PDBTitle: coiled-coil region of nudel Resolution 2.24 Å

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		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	D	A	V	G	K	K	L	Q	E	Y	H	S	Q	Y	Q	E	K	S	K	E	Y	D	R	L	Y	E	E	Y	T	R	T	S	Q	E	I	Q	M	K	R	T	A	I	E	A	F	N	E	T	I	K	I	F	E	E	Q	C	H	T	Q	E	Q	H	S	K	E	Y	I	E	R	F	R	R	E	G	N	E	K	E
Query Conservation
Alig confidence																																																																													.
Template Conservation																																																																													.
Template Sequence		D	F	S	S	L	K	E	E	T	A	Y	W	K	E	L	S	X	K	Y	K	Q	S	F	Q	E	A	R	D	E	L	V	E	F	Q	E	G	S	R	E	L	E	A	E	L	E	A	Q	L	V	Q	A	E	Q	R	N	R	D	L	Q	A	D	N	Q	R	L	K	Y	E	V	E	A	L	K	E	K	.	L	E	H	Q
Template Known Secondary structure				S	S																																																																								.
Template Predicted Secondary structure																																																																													.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.		.	.	.	.
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	R	I	M	M	N	Y	D	K	L	K	S	R	L	G	E	I	H	D	S	K	M	R	L	E	Q	D	L	K	N	Q	A	L	D	N	R	E	I	D	K	K	M	N	S	I	K	P	D	L	I	Q	L	R	K	I	R	D	Q	H	L	V	W	L	N	H	K	G	V	R	Q	K	R	L	N	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	A	Q	S	Y	K	Q	V	S	V	L	E	D	D	L	S	Q	T	R	A	I	K	E	Q	L	H	K	Y	V	R	E	L	E	Q	A	N	D	D	L	E	R	A	K	R	A	T	I	X	S	L	E	D	F	E	Q	R	L	N	Q	A	I	E	R	N	A	F	L	E	S	E	L	D	E	K	E	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions