Job Description Q92569 Confidence 99.82% Date Fri May 25 09:38:24 BST 2012 Rank 48 Aligned Residues 118 % Identity 25% Template c2izvA_ PDB info PDB header:transcription Chain: A: PDB Molecule:suppressor of cytokine signaling 4; PDBTitle: crystal structure of socs-4 in complex with elongin-b and2 elongin-c at 2.55a resolution Resolution 2.55 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.		.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.
Query SS confidence																																																	.
Query Sequence		Y	F	I	N	E	E	D	E	N	L	P	H	Y	D	E	K	T	W	F	V	E	D	I	N	R	V	Q	A	E	D	L	L	Y	G	K	P	D	G	A	F	L	I	R	E	S	S	K	.	K	G	C	Y	A	C	S	V	V	A	D	G	E	V	K	H	C	V	I	Y	S	T	A	R	G	Y	G	F	A	E	P	Y
Query Conservation																																																	.
Alig confidence																																																	.
Template Conservation
Template Sequence		Y	F	Q	S	M	L	V	P	D	L	L	Q	I	N	N	N	P	C	Y	W	G	V	M	D	K	Y	A	A	E	A	L	L	E	G	K	P	E	G	T	F	L	L	R	D	S	A	Q	E	D	Y	L	F	S	V	S	F	R	R	Y	S	R	S	L	H	A	R	I	E	Q	W	N	H	N	F	S	F	D	A	H	D
Template Known Secondary structure		S							T	T								T	T															T	T			T	T								S	S	T	T		S								T	T											T	T				S		T	T
Template Predicted Secondary structure
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
		420				.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.					.	460	.
Predicted Secondary structure			.	.	.																																							.	.	.	.
Query SS confidence			.	.	.																																							.	.	.	.
Query Sequence		N	.	.	.	L	Y	S	S	L	K	E	L	V	L	H	Y	Q	Q	T	S	L	V	Q	H	N	D	S	L	N	V	R	L	A	Y	P	V	H	A	Q	M	P	S	.	.	.	.	L	C	R
Query Conservation			.	.	.																																							.	.	.	.
Alig confidence			.	.	.																	.	.	.																				.	.	.	.
Template Conservation																						.	.	.
Template Sequence		P	C	V	F	H	S	P	D	I	T	G	L	L	E	H	Y	K	D	P	S	.	.	.	A	C	M	F	F	E	P	L	L	S	T	P	L	I	R	T	F	P	F	S	L	Q	H	I	C	R
Template Known Secondary structure		T	T	S			B	S	S								T			G	G	.	.	.	G			T	T	S											S
Template Predicted Secondary structure																						.	.	.
Template SS confidence
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.				.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions