Return to main results Retrieve Phyre Job Id

Job DescriptionQ92569
Confidence99.81%DateFri May 25 09:38:24 BST 2012
Rank64Aligned Residues111
% Identity33%Templatec1x27F_
PDB info PDB header:signaling proteinChain: F: PDB Molecule:proto-oncogene tyrosine-protein kinase lck; PDBTitle: crystal structure of lck sh2-sh3 with sh2 binding site of2 p130cas
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   339340.........350.........360.........370.. .......380....... ..390....... ..400.........410
Predicted Secondary structure 




















..







.


.....


Query SS confidence 

































. .














.









. . . . .












Query Sequence  ENYFINEEDENLPHYDEKTWFVEDINRVQAEDLL. . YGKPDGAFLIRESSK. KGCYACSVVA. . . . . DGEVKHCVIYSTA
Query Conservation 
                  
      
  
   
..     
 



 
  .     

   .....     
  
    
Alig confidence 

































..














.









.....












Template Conservation   
  
   
    


   

 
 


 


  

      
 



 
      
 


          
         
Template Sequence  EGFIPFNFVAKANSLEPEPWFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLD
Template Known Secondary structure  GGG
S
STTSTTB
SS

TSSS

TT
SSSTT

SSS

T
Template Predicted Secondary structure 





































Template SS confidence 















































































   108.110.........120.........130.........140.........150.........160.........170.........180.......
 
   411........420.........430.........440.........450....
Predicted Secondary structure 




























Query SS confidence 











































Query Sequence  RGYGFAEPYNLYSSLKELVLHYQQTSLVQHNDSLNVRLAYPVHA
Query Conservation               

  

  
    
      
   
  
   
Alig confidence 

























.....












Template Conservation             
 

  

  
    .....  
   
  

  
Template Sequence  NGGFYISPRITFPGLHELVRHYTNAS. . . . . DGLCTRLSRPCQT
Template Known Secondary structure  TS
SSTT

BSS

.....SSSSS





Template Predicted Secondary structure 









.....










Template SS confidence 











































   188.190.........200.........210... ......220......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions