 |
| Job Description | Q92569 | | Confidence | 21.64% | Date | Fri May 25 09:38:24 BST 2012 |
| Rank | 240 | Aligned Residues | 47 |
| % Identity | 19% | Template | c1ci6A_ |
| PDB info |
PDB header:transcription | Chain: A: PDB Molecule:transcription factor atf-4; |
PDBTitle: transcription factor atf4-c/ebp beta bzip heterodimer
|
| Resolution | 2.60 Å |
|
|   |   |
173 | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
N | I | D | A | V | G | K | K | L | Q | E | Y | H | S | Q | Y | Q | E | K | S | K | E | Y | D | R | L | Y | E | E | Y | T | R | T | S | Q | E | I | Q | M | K | R | T | A | I | E | A | F |
| Query Conservation |   |
  |
|
|   |
|   |   |
|
|   |
|
|   |   |   |   |   |   |   |   |
|
|   |
|   |
|   |   |
|
|   |   |
|   |   |
|
|
|   |   |
|   |   |
|
|   |
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |
|   |
|
|
|   |   |   |   |   |
|
|   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |
|   |   |   |
|
|   |   |
|   |
|
|
| Template Sequence |   |
Y | R | Q | K | K | R | A | E | Q | E | A | L | T | G | E | C | K | E | L | E | K | K | N | E | A | L | K | E | R | A | D | S | L | A | K | E | I | Q | Y | L | K | D | L | I | E | E | V |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
295 | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|