Job Description Q9Y5R4 Confidence 99.45% Date Tue Apr 3 14:35:09 BST 2012 Rank 210 Aligned Residues 178 % Identity 18% Template d2b2ca1 SCOP info S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases Spermidine synthase Resolution 2.50

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.					.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.
Query SS confidence																											.	.	.	.
Query Sequence		Y	I	L	G	E	W	D	F	Q	G	L	S	L	R	M	V	P	P	V	F	I	P	R	P	E	.	.	.	.	T	E	E	L	V	E	W	V	L	E	E	V	A	Q	R	S	H	A	V	G	S	P	G	S	P	L	I	L	E	V	G	C	G	S	G	A	I	S	L	S	L	L	S	Q	L	P	Q	S	R	V	I
Query Conservation																											.	.	.	.
Alig confidence										.																	.	.	.	.												.	.	.	.	.	.	.	.	.
Template Conservation										.																																.	.	.	.	.	.	.	.	.
Template Sequence		L	V	F	E	S	T	T	Y	.	G	N	V	L	V	L	D	G	I	V	Q	A	T	E	R	D	E	F	S	Y	Q	E	M	L	A	H	L	P	M	F	A	.	.	.	.	.	.	.	.	.	H	P	D	P	K	R	V	L	I	I	G	G	G	D	G	G	I	L	R	E	V	L	K	H	E	S	V	E	K	V	T
Template Known Secondary structure							T	T	T	.							T	T						S	S	S	S	S														.	.	.	.	.	.	.	.	.	S	S	S								S		T	T	S							T	T		T	T
Template Predicted Secondary structure										.																																.	.	.	.	.	.	.	.	.
Template SS confidence
		67	.	.	70	.	.	.	.		.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.										.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.				.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure																						.	.	.
Query SS confidence																						.	.	.
Query Sequence		A	V	D	K	R	E	A	A	I	S	L	T	H	E	N	A	Q	R	L	R	.	.	.	L	Q	D	R	I	W	I	I	H	L	D	M	T	S	E	R	S	W	T	H	L	P	W	G	P	M	D	L	I	V	S	N	P	P	Y	V	F	H	Q	D	M	E	Q	L	A	P	E	I	R	S	Y	E	D	P	A	A	L
Query Conservation																						.	.	.
Alig confidence																						.	.	.															.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	C	E	I	D	E	M	V	I	D	V	A	K	K	F	L	P	G	M	S	C	G	F	S	H	P	K	L	D	L	F	C	G	D	G	F	E	.	.	.	F	L	K	N	H	K	N	E	F	D	V	I	I	T	D	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					S													T	T	T	S	G	G	G	G		T	T						S					.	.	.						T	T										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																							.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.				.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.			.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.						.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.																												.	.	.	.	.
Query SS confidence																																			.	.																												.	.	.	.	.
Query Sequence		D	G	G	E	E	G	M	D	I	I	T	H	I	L	A	L	A	P	R	L	L	K	D	S	G	S	I	F	L	E	V	D	P	.	.	R	H	P	E	L	V	S	S	W	L	Q	S	R	P	D	L	Y	L	N	L	V	A	V	R	R	D	F	.	.	.	.	.	C	G	R	P	R	F	L	H	I	R	R	S	G
Query Conservation																																			.	.																												.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																							.	.																	.											.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.																																									.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	S	Y	Y	E	L	L	R	D	A	L	K	E	D	G	I	L	S	S	Q	G	E	S	V	W	L	H	L	P	L	I	A	H	L	V	A	F	N	R	K	I	.	F	P	A	V	T	Y	A	Q	S	I	V	S	T	Y	P	S	G	S	M	G	Y	L	I	C	A	K	N	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.																							T	T	T																.		S										T	T	S	G	G	G									S	S	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																																									.
Template SS confidence
													203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.		.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
		338
Predicted Secondary structure
Query SS confidence
Query Sequence		P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		271

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions