Job Description Q9Y5R4 Confidence 99.51% Date Tue Apr 3 14:35:09 BST 2012 Rank 179 Aligned Residues 197 % Identity 16% Template d1uira_ SCOP info S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases Spermidine synthase Resolution 2.00

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		109	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.					.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure							.																				.	.	.	.
Query SS confidence							.																				.	.	.	.
Query Sequence		P	V	Q	Y	I	.	L	G	E	W	D	F	Q	G	L	S	L	R	M	V	P	P	V	F	I	.	.	.	.	P	R	P	E	T	E	E	L	V	E	W	V	L	E	E	V	A	Q	R	S	H	A	V	G	S	P	G	S	P	L	I	L	E	V	G	C	G	S	G	A	I	S	L	S	L	L	S	Q	L	P	Q
Query Conservation							.																				.	.	.	.
Alig confidence							.																				.	.	.	.																.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.
Template Sequence		P	F	Q	D	Y	F	L	F	E	S	K	G	F	G	K	V	L	I	L	D	K	D	V	Q	S	T	E	R	D	E	Y	I	Y	H	E	T	L	V	H	P	A	M	L	T	.	.	.	.	.	.	.	.	.	H	P	E	P	K	R	V	L	I	V	G	G	G	E	G	A	T	L	R	E	V	L	K	H	P	T	V
Template Known Secondary structure		S	S									T	T	T							T	T						T	T	T																.	.	.	.	.	.	.	.	.	S	S											T	T	S							T	T	S	T	T
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.										.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.					.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.
Query SS confidence																											.	.	.	.
Query Sequence		S	R	V	I	A	V	D	K	R	E	A	A	I	S	L	T	H	E	N	A	Q	R	L	R	L	.	.	.	.	Q	D	R	I	W	I	I	H	L	D	M	T	S	E	R	S	W	T	H	L	P	W	G	P	M	D	L	I	V	S	N	P	P	Y	V	F	H	Q	D	M	E	Q	L	A	P	E	I	R	S	Y	E
Query Conservation																											.	.	.	.
Alig confidence																											.	.	.	.														.	.	.																								.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.																								.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	K	A	V	M	V	D	I	D	G	E	L	V	E	V	A	K	R	H	M	P	E	W	H	Q	G	A	F	D	D	P	R	A	V	L	V	I	D	D	A	R	A	.	.	.	Y	L	E	R	T	E	E	R	Y	D	V	V	I	I	D	L	T	D	P	V	G	E	D	.	.	.	.	.	.	.	.	.	.	.	N
Template Known Secondary structure									S																	T	T	G	G	G		T	T						S					.	.	.																				B	S	T	T	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																												.	.	.																								.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.				.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.												.
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.					.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure																																																																		.	.	.	.
Query SS confidence																																																																		.	.	.	.
Query Sequence		D	P	A	A	L	D	G	G	E	E	G	M	D	I	I	T	H	I	L	A	L	A	P	R	L	L	K	D	S	G	S	I	F	L	E	V	D	P	R	H	P	E	L	V	S	S	W	L	Q	S	R	P	D	L	Y	L	N	L	V	A	V	R	R	D	.	.	.	.	F	C	G	R	P	R	F	L	H	I	R	R
Query Conservation																																																																		.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.																																								.										.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.																																								.
Template Sequence		P	A	R	L	L	Y	T	.	.	.	.	.	.	.	.	V	E	F	Y	R	L	V	K	A	H	L	N	P	G	G	V	M	G	M	Q	T	G	M	I	L	L	R	V	H	P	V	V	H	R	T	V	R	E	A	.	F	R	Y	V	R	S	Y	K	N	H	I	P	G	F	F	L	N	F	G	F	L	L	A	S	D
Template Known Secondary structure		G	G	G	G	G	S	S	.	.	.	.	.	.	.	.										T																												T	T	.		S										G	G	G	T										S
Template Predicted Secondary structure									.	.	.	.	.	.	.	.																																								.
Template SS confidence
		168	.	170	.	.	.	.									.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.		.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		336	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	F
Template Known Secondary structure		S	S
Template Predicted Secondary structure
Template SS confidence
		242	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions