Job Description Q9Y5R4 Confidence 99.29% Date Tue Apr 3 14:35:09 BST 2012 Rank 251 Aligned Residues 174 % Identity 17% Template c3ll7A_ PDB info PDB header:transferase Chain: A: PDB Molecule:putative methyltransferase; PDBTitle: crystal structure of putative methyltransferase pg_1098 from2 porphyromonas gingivalis w83 Resolution 1.80 Å

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		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.																					.	.	.	130	.	.	.	.	.							.	.	.	.	140	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.
Query Sequence		L	T	S	Q	Q	L	Q	C	I	R	E	L	S	S	R	R	L	Q	R	M	P	V	Q	Y	I	L	G	E	W	D	F	Q	G	L	S	L	R	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	P	P	V	F	I	P	R	P	.	.	.	.	.	.	E	T	E	E	L	V	E
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.
Template Conservation
Template Sequence		F	D	E	K	E	I	L	A	I	T	R	W	A	K	L	Y	A	N	Q	S	P	D	R	I	L	L	G	S	N	D	I	P	P	E	Y	R	A	A	V	A	T	Q	I	E	L	W	P	R	L	R	N	K	L	P	Q	W	A	G	I	S	S	L	Y	I	P	S	R	L	S	L	E	Q	S	S	G	A	V	T	S	S
Template Known Secondary structure																	T	T	T	S								S	S	S	S																												T	S	T	T												S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.		.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure																																																																		.
Query SS confidence																																																																		.
Query Sequence		W	V	L	E	E	V	A	Q	R	S	H	A	V	G	S	P	G	S	P	L	I	L	E	V	G	C	G	S	G	A	I	S	L	S	L	L	S	Q	L	P	Q	S	R	V	I	A	V	D	K	R	E	A	A	I	S	L	T	H	E	N	A	Q	R	L	.	R	L	Q	D	R	I	W	I	I	H	L	D	M	T	S
Query Conservation																																																																		.
Alig confidence										.	.	.	.	.	.	.	.	.																						.	.																									.
Template Conservation										.	.	.	.	.	.	.	.	.																						.	.
Template Sequence		Y	K	S	R	F	I	R	E	.	.	.	.	.	.	.	.	.	G	T	K	V	V	D	L	T	G	G	L	G	I	D	F	I	A	L	X	S	K	.	.	A	S	Q	G	I	Y	I	E	R	N	D	E	T	A	V	A	A	R	H	N	I	P	L	L	L	N	E	G	K	D	V	N	I	L	T	G	D	F	K	E
Template Known Secondary structure			G	G	G	G	S		T	.	.	.	.	.	.	.	.	.	T						S	S		S	S	S								T	T	.	.		S							S																S		T	T								S		G	G	G
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.																						.	.
Template SS confidence
		83	.	.	.	.	.	.	90										.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.			.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	S	W	T	H	L	P	W	G	P	M	D	L	I	V	S	N	P	P	Y	V	F	H	Q	D	M	E	Q	L	A	P	E	I	R	S	Y	E	D	P	A	A	L	D	G	G	E	E	G	M	D	I	I	T	H	I	L	A	L	A	P	R	L	L	K	D	S	G	S	I	F	L	E	V	D	P
Query Conservation
Alig confidence								.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	L	P	L	I	K	.	.	T	F	H	P	D	Y	I	Y	V	D	P	A	R	R	R	V	Y	A	I	A	D	C	E	P	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	P	L	A	T	E	L	L	P	F	C	S	S	I	L	A	K	L	S	P
Template Known Secondary structure		S						.	.					S														G	G	G			S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								G	G	G	S	S								T
Template Predicted Secondary structure								.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		152	.	.	.	.	.			.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.																							.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions