Job Description Q9Y5R4 Confidence 99.50% Date Tue Apr 3 14:35:09 BST 2012 Rank 185 Aligned Residues 158 % Identity 15% Template c3lkdB_ PDB info PDB header:transferase Chain: B: PDB Molecule:type i restriction-modification system PDBTitle: crystal structure of the type i restriction-modification2 system methyltransferase subunit from streptococcus3 thermophilus, northeast structural genomics consortium4 target sur80 Resolution 2.25 Å

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		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180				.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.
Query SS confidence																																																					.	.	.
Query Sequence		V	F	I	P	R	P	E	T	E	E	L	V	E	W	V	L	E	E	V	A	Q	R	S	H	A	V	G	S	P	G	S	P	L	I	L	E	V	G	C	G	S	G	A	I	S	L	S	L	L	S	Q	.	.	.	L	P	Q	S	R	V	I	A	V	D	K	R	E	A	A	I	S	L	T	H	E	N	A	Q	R	L
Query Conservation																																																					.	.	.
Alig confidence																				.	.	.	.	.	.	.																											.	.	.
Template Conservation																				.	.	.	.	.	.	.
Template Sequence		F	Y	T	P	Q	P	V	A	K	L	X	T	Q	I	A	F	L	G	.	.	.	.	.	.	.	R	E	D	K	Q	G	F	T	L	Y	D	A	T	X	G	S	G	S	L	L	L	N	A	K	R	Y	S	R	Q	P	Q	T	V	V	Y	F	G	Q	E	L	N	T	S	T	Y	N	L	A	R	X	N	X	I	L	H
Template Known Secondary structure																		T	T	.	.	.	.	.	.	.		T	T		S	S						T	T		T	T	S	T	T	G	G	G						S		G	G	G								S															T
Template Predicted Secondary structure																				.	.	.	.	.	.	.
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.								.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
		207	.	.	210		.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		R	L	Q	D	.	R	I	W	I	I	H	L	D	M	T	S	E	R	S	W	T	H	L	P	W	G	P	M	D	L	I	V	S	N	P	P	Y	V	F	H	Q	D	M	E	Q	L	A	P	E	I	R	S	Y	E	D	P	A	A	L	D	G	G	E	E	G	M	D	I	I	T	H	I	L	A	L	A	P	R	L	L
Query Conservation						.
Alig confidence						.														.																																															.	.	.
Template Conservation																				.																																															.	.	.
Template Sequence		G	V	P	I	E	N	Q	F	L	H	N	A	D	T	L	D	E	D	.	W	P	T	Q	E	P	T	N	F	D	G	V	L	X	N	P	P	Y	S	A	K	W	S	A	S	S	G	F	X	D	D	P	R	F	S	P	F	G	K	L	A	P	K	S	K	A	.	.	.	D	F	A	F	L	L	H	G	Y	Y	H	L
Template Known Secondary structure		T			G	G	G						S		T	T	T	S		.	S			S	S				B	S								B	T							G	G	G	G	G	S	T	T	T	G	G	G	S	S				T	T			.	.	.											T	B
Template Predicted Secondary structure																				.																																															.	.	.
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.				.	.	.	.	340	.	.	.	.	.	.	.
		286	.		.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		K	D	.	S	G	S	I	F	L	E	V	D	P	R
Query Conservation				.
Alig confidence				.
Template Conservation
Template Sequence		K	Q	D	N	G	V	X	A	I	V	L	P	H	G
Template Known Secondary structure			T	T	T									T
Template Predicted Secondary structure
Template SS confidence
		348	.	350	.	.	.	.	.	.	.	.	.	360	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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