Job Description Q9Y5R4 Confidence 99.53% Date Tue Apr 3 14:35:09 BST 2012 Rank 167 Aligned Residues 151 % Identity 19% Template c3khkA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:type i restriction-modification system PDBTitle: crystal structure of type-i restriction-modification system2 methylation subunit (mm_0429) from methanosarchina mazei. Resolution 2.55 Å

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		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180																.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	F	I	P	R	P	E	T	E	E	L	V	E	W	V	L	E	E	V	A	Q	R	S	H	A	V	G	S	P	G	S	P	L	I	L	E	V	G	C	G	S	G	A	I	S	L	S	L	L	S	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	Q	S	R	V	I	A	V	D	K	R	E	A
Query Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	Y	T	P	K	S	I	V	T	L	I	V	E	M	L	.	.	.	.	.	.	.	.	.	.	.	.	E	P	Y	K	G	R	V	Y	D	P	A	M	G	S	G	G	F	F	V	S	S	D	K	F	I	E	K	H	A	N	V	K	H	Y	N	A	S	E	Q	K	K	Q	I	S	V	Y	G	Q	E	S	N	P	T
Template Known Secondary structure		T															.	.	.	.	.	.	.	.	.	.	.	.				S						S	S		T	T																			T	S						G	G	G
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240													.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.		.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure																																																		.
Query SS confidence																																																		.
Query Sequence		A	I	S	L	T	H	E	N	A	Q	R	L	R	L	Q	D	R	I	W	I	I	H	L	D	M	T	S	E	R	S	W	T	H	L	P	W	G	P	M	D	L	I	V	S	N	P	P	Y	.	V	F	H	Q	D	M	E	Q	L	A	P	E	I	R	S	Y	E	D	P	A	A	L	D	G	G	E	E	G	M	D	I
Query Conservation																																																		.
Alig confidence																																.	.	.																.
Template Conservation																																.	.	.
Template Sequence		T	W	K	L	A	A	M	N	M	V	I	R	G	I	D	F	N	F	G	K	K	N	A	D	S	F	L	D	D	Q	.	.	.	H	P	D	L	R	A	D	F	V	M	T	N	P	P	F	N	M	K	D	W	W	H	E	K	L	A	D	D	P	R	W	T	I	N	T	N	K	R	I	L	T	P	P	T	G	N	A
Template Known Secondary structure													T	T				B			S	S	S			T	T	T	S		S	.	.	.		T	T												S	S			S				G	G	G	T	T		G	G	G													T	T		T
Template Predicted Secondary structure																																.	.	.
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.				.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	H	I	L	A	L	A	P	R	L	L	K	D	S	G	S	I	F	L	E	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	F	A	W	M	L	H	M	L	Y	H	L	A	P	T	G	S	M	A	L	L	L
Template Known Secondary structure												T
Template Predicted Secondary structure
Template SS confidence
		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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