Job Description Q9Y5R4 Confidence 98.52% Date Tue Apr 3 14:35:09 BST 2012 Rank 294 Aligned Residues 131 % Identity 18% Template c3htxA_ PDB info PDB header:transferase/rna Chain: A: PDB Molecule:hen1; PDBTitle: crystal structure of small rna methyltransferase hen1 Resolution 3.10 Å

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		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure																																																												.
Query SS confidence																																																												.
Query Sequence		M	V	P	P	V	F	I	P	R	P	E	T	E	E	L	V	E	W	V	L	E	E	V	A	Q	R	S	H	A	V	G	S	P	G	S	P	L	I	L	E	V	G	C	G	S	G	A	I	S	L	S	L	L	S	Q	L	P	Q	.	S	R	V	I	A	V	D	K	R	E	A	A	I	S	L	T	H	E	N	A	Q
Query Conservation																																																												.
Alig confidence										.																	.	.	.	.	.	.	.																											.
Template Conservation										.																	.	.	.	.	.	.	.
Template Sequence		M	E	A	A	F	F	K	P	.	P	L	S	K	Q	R	V	E	Y	A	L	K	H	I	R	E	.	.	.	.	.	.	.	S	S	A	S	T	L	V	D	F	G	C	G	S	G	S	L	L	D	S	L	L	D	Y	P	T	S	L	Q	T	I	I	G	V	D	I	S	P	K	G	L	A	R	A	A	K	M	L	H
Template Known Secondary structure							S	S	S	.																	.	.	.	.	.	.	.	S			S						T		S	S	S							T	S	S												S
Template Predicted Secondary structure										.																	.	.	.	.	.	.	.
Template SS confidence
		688	.	690	.	.	.	.	.		.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.								.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.
		205	.	.	.	.	210	.						.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.
Query SS confidence									.	.	.	.	.
Query Sequence		R	L	R	L	Q	D	R	.	.	.	.	.	I	W	I	I	H	L	D	M	T	S	E	R	S	W	T	H	L	P	W	G	P	M	D	L	I	V	S	N	P	P	Y	V	F	H	Q	D	M	E	Q	L	A	P	E	I	R	S	Y	E	D	P	A	A	L	D	G	G	E	E	G	M	D	I	I	T	H	I	L	A
Query Conservation									.	.	.	.	.
Alig confidence									.	.	.	.	.																	.	.	.	.								.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.								.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	K	L	N	K	E	A	C	N	V	K	S	A	T	L	Y	D	G	S	I	L	E	F	D	S	R	L	H	.	.	.	.	D	V	D	I	G	T	C	.	.	.	.	.	.	L	E	V	I	E	H	M	E	E	D	Q	A	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	F	G	E
Template Known Secondary structure				T	T	T	T		S	S		S							S		T	T	S			T	T	S		.	.	.	.	S							.	.	.	.	.	.		S		G	G	G	S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																														.	.	.	.								.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.					.	.	790	.	.	.	.							.	.	.	.	.	800	.	.	.	.	.	.	.																			.	.	810	.
		280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	P	R	L	L	K	D	S	G	S	I	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	V	L	S	L	F	H	P	K	L	L	I	V
Template Known Secondary structure						T	T			S
Template Predicted Secondary structure
Template SS confidence
		812	.	.	.	.	.	.	.	820	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions