Job Description Q9Y5R4 Confidence 97.67% Date Tue Apr 3 14:35:09 BST 2012 Rank 314 Aligned Residues 144 % Identity 17% Template c3g7uA_ PDB info PDB header:transferase Chain: A: PDB Molecule:cytosine-specific methyltransferase; PDBTitle: crystal structure of putative dna modification methyltransferase2 encoded within prophage cp-933r (e.coli) Resolution 1.75 Å

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		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.					.	230	.	.	.	.	.	.
Predicted Secondary structure																																																																						.	.	.	.
Query SS confidence																																																																						.	.	.	.
Query Sequence		P	L	I	L	E	V	G	C	G	S	G	A	I	S	L	S	L	L	S	Q	L	P	Q	S	R	V	I	A	V	D	K	R	E	A	A	I	S	L	T	H	E	N	A	Q	R	L	R	L	Q	D	R	I	W	I	I	H	L	D	M	T	S	E	R	S	W	T	H	L	.	.	.	.	P	W	G	P	M	D	L	I
Query Conservation																																																																						.	.	.	.
Alig confidence																						.																						.	.	.	.	.	.																					.	.	.	.
Template Conservation																						.																						.	.	.	.	.	.
Template Sequence		L	N	V	I	D	L	F	S	G	V	G	G	L	S	L	G	A	A	R	A	.	G	F	D	V	K	M	A	V	E	I	D	Q	H	A	I	N	T	H	A	I	N	.	.	.	.	.	.	F	P	R	S	L	H	V	Q	E	D	V	S	L	L	N	A	E	I	I	K	G	F	F	K	N	D	M	P	I	D	G	I
Template Known Secondary structure								T		T	T	S										.	T									S												.	.	.	.	.	.		T	T	S							G	G	G												S
Template Predicted Secondary structure																						.																						.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20		.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.							.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.									.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																															.	.	.	.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.	.	.	.
Query Sequence		V	S	N	P	P	Y	V	F	H	Q	D	M	E	Q	L	A	P	E	I	R	S	Y	E	D	P	A	A	L	D	G	G	E	E	G	M	D	I	I	T	H	I	L	A	L	A	P	R	L	L	K	D	S	G	S	I	F	L	E	V	D	P	.	.	.	.	.	.	.	.	R	H	P	E	L	V	S	S	W	L	Q
Query Conservation																																																															.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.									.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template Sequence		I	G	G	P	P	C	Q	G	F	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	D	S	R	N	Q	L	Y	M	H	F	Y	R	L	V	S	E	L	Q	P	L	.	F	F	L	A	E	N	V	P	G	I	M	Q	E	K	Y	S	G	I	R	N	K	A	F	N	L	V	S
Template Known Secondary structure									T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					S	.								T	T	T	T		G	G	G
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.																						.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.				.	.	.	.	.	330	.	.	.
Predicted Secondary structure																		.	.	.
Query SS confidence																		.	.	.
Query Sequence		S	R	P	D	L	Y	L	N	L	V	A	V	R	R	D	F	.	.	.	C	G	R	P	R	F	L	H	I
Query Conservation																		.	.	.
Alig confidence																		.	.	.
Template Conservation
Template Sequence		G	D	Y	D	I	L	D	P	I	K	V	K	A	S	D	Y	G	A	P	T	I	R	T	R	Y	F	F	I
Template Known Secondary structure		T	T											G	G	G	G	T		S	B
Template Predicted Secondary structure
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions