Job Description Q9Y5R4 Confidence 99.48% Date Tue Apr 3 14:35:09 BST 2012 Rank 197 Aligned Residues 145 % Identity 15% Template c3fzgA_ PDB info PDB header:transferase Chain: A: PDB Molecule:16s rrna methylase; PDBTitle: structure of the 16s rrna methylase arma Resolution 2.00 Å

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		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	T	E	E	L	V	E	W	V	L	E	E	V	A	Q	R	S	H	A	V	G	S	P	G	S	P	L	I	L	E	V	G	C	G	S	G	A	I	S	L	S	L	L	S	Q	L	P	Q	S	R	V	I	A	V	D	K	R	E	A	A	I	S	L	T	H	E	N	A	Q	R	L	R	L	Q	D	R	I	W	I
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.																																																				.	.
Template Conservation																	.	.	.	.	.	.	.	.	.																																																				.	.
Template Sequence		A	T	L	N	D	F	Y	T	Y	V	F	G	N	I	K	.	.	.	.	.	.	.	.	.	H	V	S	S	I	L	D	F	G	C	G	F	N	P	L	A	L	Y	Q	W	N	E	N	E	K	I	I	Y	H	A	Y	D	I	D	R	A	E	I	A	F	L	S	S	I	I	G	K	L	K	T	T	.	.	I	K	Y
Template Known Secondary structure		G	G												S		.	.	.	.	.	.	.	.	.			S						T		T	T										S	S										S															S			S	.	.	S
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.																																																				.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.										.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.			.	.	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	H	L	D	M	T	S	E	R	S	W	T	H	L	P	W	G	P	M	D	L	I	V	S	N	P	P	Y	V	F	H	Q	D	M	E	Q	L	A	P	E	I	R	S	Y	E	D	P	A	A	L	D	G	G	E	E	G	M	D	I	I	T	H	I	L	A	L	A	P	R	L	L	K	D	S	G	S	I	F	L	E
Query Conservation
Alig confidence											.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	F	L	N	K	E	S	D	V	.	.	.	.	.	Y	K	G	T	Y	D	V	V	F	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	M	L	P	V	.	.	.	.	.	.	.	.	.	.	.	.	L	K	Q	Q	D	V	N	I	L	D	F	L	Q	L	F	H	T	Q	N	F	V	I	S	F
Template Known Secondary structure											.	.	.	.	.	T	T	S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	T					.	.	.	.	.	.	.	.	.	.	.	.				T	T									T
Template Predicted Secondary structure											.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.						.	170	.	.	.	.	.	.	.	.	.															180	.	.	.	.													.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		295	.	.	.	.	300	.	.						.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure										.	.	.	.	.
Query SS confidence										.	.	.	.	.
Query Sequence		V	D	P	R	H	P	E	L	.	.	.	.	.	V	S	S	W	L	Q	S	R	P	D	L	Y	L	N	L	V	A	V	R
Query Conservation										.	.	.	.	.
Alig confidence										.	.	.	.	.
Template Conservation
Template Sequence		P	I	K	S	L	S	E	K	G	M	E	E	N	Y	Q	L	W	F	E	S	F	T	K	G	W	I	K	I	L	D	S	K
Template Known Secondary structure									T	T													T	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions