Job Description Q9Y5R4 Confidence 92.48% Date Tue Apr 3 14:35:09 BST 2012 Rank 339 Aligned Residues 142 % Identity 15% Template c3e18A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:oxidoreductase; PDBTitle: crystal structure of nad-binding protein from listeria innocua Resolution 1.95 Å

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		159	160	.	.	.	.	.	.	.	.	.	170		.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure														.																				.
Query SS confidence														.																				.
Query Sequence		G	S	P	L	I	L	E	V	G	C	G	S	.	G	A	I	S	L	S	L	L	S	Q	L	P	Q	S	R	V	I	A	V	.	D	K	R	E	A	A	I	S	L	T	H	E	N	A	Q	R	L	R	L	Q	D	R	I	W	I	I	H	L	D	M	T	S	E	R	S	W	T	H	L	P	W	G	P	M	D	L	I
Query Conservation														.																				.
Alig confidence														.																				.													.	.	.	.					.	.	.	.	.											.	.	.	.	.
Template Conservation																																															.	.	.	.					.	.	.	.	.											.	.	.	.	.
Template Sequence		K	K	Y	Q	L	V	I	V	G	Y	G	G	M	G	S	Y	H	V	T	L	A	S	A	A	D	N	L	E	V	H	G	V	F	D	I	L	A	E	K	R	E	A	A	A	Q	.	.	.	.	K	G	L	K	.	.	.	.	.	I	Y	E	S	Y	E	A	V	L	A	.	.	.	.	.	D	E	K	V	D	A	V
Template Known Secondary structure												S												T	S	T	T									S	S									T	.	.	.	.	T	T			.	.	.	.	.	B		S								.	.	.	.	.		T	T
Template Predicted Secondary structure																																															.	.	.	.					.	.	.	.	.											.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.					.	.	.	50						.	.	.	.	.	.	.	.	.	60						.	.	.	.	.	.	.
			237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.			.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure		.																						.	.
Query SS confidence		.																						.	.
Query Sequence		.	V	S	N	P	P	Y	V	F	H	Q	D	M	E	Q	L	A	P	E	I	R	S	.	.	Y	E	D	P	A	A	L	D	G	G	E	E	G	M	D	I	I	T	H	I	L	A	L	A	P	R	L	L	K	D	S	G	S	I	F	L	E	V	D	P	R	H	P	E	L	V	S	S	W	L	Q	S	R	P	D	L
Query Conservation		.																						.	.
Alig confidence		.																						.	.									.	.	.	.	.															.	.	.
Template Conservation																																		.	.	.	.	.															.	.	.
Template Sequence		L	I	A	T	P	N	D	S	H	K	E	L	A	I	S	A	L	E	A	G	K	H	V	V	C	E	K	P	V	T	M	T	.	.	.	.	.	S	E	D	L	L	A	I	M	D	V	A	K	R	V	.	.	.	N	K	H	F	M	V	H	Q	N	R	R	W	D	E	D	F	L	I	I	K	E	M	F	E	Q	K
Template Known Secondary structure					S		G	G	G											T	T							S	S			S	S	.	.	.	.	.															.	.	.	T								G	G	G	G														T
Template Predicted Secondary structure																																		.	.	.	.	.															.	.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.						100	.	.	.	.	.	.	.	.	.	110	.	.	.				.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		314	.	.	.	.	.	320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	L	N	L	V	A	V	R	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	I	G	E	M	F	H	L	E
Template Known Secondary structure		T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		140	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions