Job Description Q9Y5R4 Confidence 99.47% Date Tue Apr 3 14:35:09 BST 2012 Rank 205 Aligned Residues 143 % Identity 16% Template c3b89A_ PDB info PDB header:transferase Chain: A: PDB Molecule:16s rrna methylase; PDBTitle: crystal structure of rrna methylase from escherichia coli Resolution 2.60 Å

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		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	P	G	S	P	L	I	L	E	V	G	C	G	S	G	A	I	S	L	S	L	L	S	Q	L	P	Q	S	R	V	I	A	V	D	K	R	E	A	A	I	S	L	T	H	E	N	A	Q	R	L	R	L	Q	D	R	I	W	I	I	H	L	D	M	T	S	E	R	S	W	T	H	L	P	W	G	P	M	D	L
Query Conservation
Alig confidence																									.	.	.																													.	.													.	.	.	.	.
Template Conservation																									.	.	.																													.	.													.	.	.	.	.
Template Sequence		S	A	E	T	P	R	R	V	L	D	I	A	C	G	L	N	P	L	A	L	Y	E	R	.	.	.	G	I	A	S	V	W	G	C	D	I	H	Q	G	L	G	D	V	I	T	P	F	A	R	E	K	D	W	D	.	.	F	T	F	A	L	Q	D	V	L	C	A	P	.	.	.	.	.	P	A	E	A	G	D	L
Template Known Secondary structure		S	S				S						T		T	T	T						T	T	.	.	.	T		S							S	B													T	T	T			.	.								T	T	T	S		.	.	.	.	.				B		S
Template Predicted Secondary structure																									.	.	.																													.	.													.	.	.	.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.				.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150			.	.	.	.	.	.	.	.	.	160	.	.						.	.	.	.	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	S	N	P	P	Y	V	F	H	Q	D	M	E	Q	L	A	P	E	I	R	S	Y	E	D	P	A	A	L	D	G	G	E	E	G	M	D	I	I	T	H	I	L	A	L	A	P	R	L	L	K	D	S	G	S	I	F	L	E	V	D	P	R	H	P	E	L	V	S	S	W	L	Q	S	R	P	D	L	Y	L
Query Conservation
Alig confidence					.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Template Conservation					.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Template Sequence		A	L	I	.	.	.	.	.	.	F	K	L	L	P	L	L	E	R	E	Q	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	A	X	A	L	L	Q	S	L	N	T	P	R	X	A	V	S	F	P	T	R	S	E	A	N	.	.	Y	A	A	W	F	E	G	G	L	P	A	E	F
Template Known Secondary structure					.	.	.	.	.	.		S									S	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T		B		S								S					S	.	.											T	T
Template Predicted Secondary structure					.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Template SS confidence
		170	.	.							.	.	.	.	.	.	.	180	.	.	.	.	.																			.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210			.	.	.	.	.	.	.	.	.	220	.	.	.
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	V	A	V	R	R	D	F	C	G	R	P	R	F	L	H	I	R	R	S
Query Conservation
Alig confidence								.	.
Template Conservation								.	.
Template Sequence		E	I	E	D	K	K	.	.	T	I	G	T	E	L	I	Y	L	I	K	K	N
Template Known Secondary structure								.	.			T	T
Template Predicted Secondary structure								.	.
Template SS confidence
		232	.	.	.	.	.			.	.	240	.	.	.	.	.	.	.	.	.	250

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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