Job Description Q9Y5R4 Confidence 98.30% Date Tue Apr 3 14:35:09 BST 2012 Rank 300 Aligned Residues 142 % Identity 17% Template c2wa1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:non-structural protein 5; PDBTitle: structure of the methyltransferase domain from modoc virus,2 a flavivirus with no known vector (nkv) Resolution 2.00 Å

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		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.				.
Predicted Secondary structure																																																																														.	.	.
Query SS confidence																																																																														.	.	.
Query Sequence		E	V	A	Q	R	S	H	A	V	G	S	P	G	S	P	L	I	L	E	V	G	C	G	S	G	A	I	S	L	S	L	L	S	Q	L	P	Q	S	R	V	I	A	V	D	K	R	E	A	A	I	S	L	T	H	E	N	A	Q	R	L	R	L	Q	D	R	I	W	I	I	H	L	D	M	T	S	E	.	.	.	R
Query Conservation																																																																														.	.	.
Alig confidence																																																		.	.	.	.	.	.	.	.	.	.																			.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.	.	.
Template Sequence		K	L	A	W	I	D	E	R	G	G	V	E	L	K	G	T	V	V	D	L	G	C	G	R	G	S	W	S	Y	Y	A	A	S	Q	P	N	V	R	E	V	K	A	Y	T	L	G	T	S	.	.	.	.	.	.	.	.	.	.	G	H	E	K	P	R	L	V	E	T	F	G	W	N	L	I	T	F	K	S	K	V
Template Known Secondary structure									T	T	S											T		T	T	S								T	S	T	T											S	T	.	.	.	.	.	.	.	.	.	.	T	S									T	T	G	G	G						S
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.											110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.			.	.	.	290	.	.	.	.	.		.	.	.	.	300
Predicted Secondary structure																																																																	.	.										.
Query SS confidence																																																																	.	.										.
Query Sequence		S	W	T	H	L	P	W	G	P	M	D	L	I	V	S	N	P	P	Y	V	F	H	Q	D	M	E	Q	L	A	P	E	I	R	S	Y	E	D	P	A	A	L	D	G	G	E	E	G	M	D	I	I	T	H	I	L	A	L	A	P	R	L	L	K	.	.	D	S	G	S	I	F	L	E	V	.	D	P	R	H	P
Query Conservation																																																																	.	.										.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.										.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	V	T	K	M	E	P	F	Q	A	D	T	V	L	C	D	I	G	E	S	N	P	T	A	A	V	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	R	T	L	T	V	L	N	V	I	S	R	W	L	E	Y	N	Q	G	C	G	F	C	V	K	V	L	N	P	Y	S	C
Template Known Secondary structure			T	T	T							S											S	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		S	T	T								S				S
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.																					.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	V	S	S	W	L	Q	S	R	P	D	L	Y	L	N	L	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	V	L	E	A	L	M	K	M	Q	A	R	F	G	G	G	L	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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