Job Description Q9Y5R4 Confidence 99.58% Date Tue Apr 3 14:35:09 BST 2012 Rank 132 Aligned Residues 161 % Identity 19% Template c2vs1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:uncharacterized rna methyltransferase pyrab10780; PDBTitle: the crystal structure of pyrococcus abyssi trna (uracil-54,2 c5)-methyltransferase in complex with s-adenosyl-l-3 homocysteine Resolution 2.1 Å

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		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.			.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure																		.	.
Query SS confidence																		.	.
Query Sequence		D	F	Q	G	L	S	L	R	M	V	P	P	V	F	I	P	.	.	R	P	E	T	E	E	L	V	E	W	V	L	E	E	V	A	Q	R	S	H	A	V	G	S	P	G	S	P	L	I	L	E	V	G	C	G	S	G	A	I	S	L	S	L	L	S	Q	L	P	Q	S	R	V	I	A	V	D	K	R	E	A	A
Query Conservation																		.	.
Alig confidence																		.	.																	.	.	.	.	.	.	.	.	.	.																						.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.																						.	.
Template Sequence		R	L	D	D	V	D	Y	L	I	H	P	N	S	F	F	Q	T	N	S	Y	Q	A	V	N	L	V	R	K	V	S	E	L	V	E	.	.	.	.	.	.	.	.	.	.	G	E	K	I	L	D	M	Y	S	G	V	G	T	F	G	I	Y	L	A	K	R	.	.	G	F	N	V	K	G	F	D	S	N	E	F	A
Template Known Secondary structure				T	T							T	T	S				S	B																	.	.	.	.	.	.	.	.	.	.	S	S						T		T	T	T								T	T	.	.	T								S
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.																						.	.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270											.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.			.	.	.	.	.	.	.	.	300	.	.	.	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	L	T	H	E	N	A	Q	R	L	R	L	Q	D	R	I	W	I	I	H	L	D	M	T	S	E	R	S	W	T	H	L	P	W	G	P	M	D	L	I	V	S	N	P	P	Y	V	F	H	Q	D	M	E	Q	L	A	P	E	I	R	S	Y	E	D	P	A	A	L	D	G	G	E	E	G	M	D	I	I	T
Query Conservation
Alig confidence																	.													.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.													.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	E	M	A	R	R	N	V	E	I	N	N	V	D	A	.	E	F	E	V	A	S	D	R	E	V	S	V	.	.	.	.	.	.	.	K	G	F	D	T	V	I	V	D	P	P	R	A	G	L	H	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure												T	T				.							T	T	T				.	.	.	.	.	.	.	T	T		S								T	T		S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																	.													.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.		320	.	.	.	.	.	.	.	.	.	330	.								.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.		.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure																																																.
Query SS confidence																																																.
Query Sequence		H	I	L	A	L	A	P	R	L	L	K	D	S	G	S	I	F	L	E	V	D	P	R	H	P	E	L	V	S	S	W	L	Q	S	R	P	D	L	Y	L	N	L	V	A	V	R	.	R	D	F	C	G	R	P	R	F	L	H	I
Query Conservation																																																.
Alig confidence											.									.	.	.															.	.	.									.
Template Conservation											.									.	.	.															.	.	.
Template Sequence		R	L	V	K	R	L	N	R	E	.	K	P	G	V	I	V	Y	V	.	.	.	S	C	N	P	E	T	F	A	R	D	V	K	M	L	.	.	.	D	Y	R	I	D	E	I	V	A	L	D	M	F	P	H	T	P	H	V	E	L
Template Known Secondary structure											.			S						.	.	.		S												T	.	.	.	T												S	T	T	S	S
Template Predicted Secondary structure											.									.	.	.															.	.	.
Template SS confidence
		349	350	.	.	.	.	.	.	.		.	.	360	.	.	.	.	.				.	.	.	.	370	.	.	.	.	.	.	.	.	.				380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions