Job Description Q9Y5R4 Confidence 78.93% Date Tue Apr 3 14:35:09 BST 2012 Rank 381 Aligned Residues 134 % Identity 13% Template c2pv0A_ PDB info PDB header:transferase regulator Chain: A: PDB Molecule:dna (cytosine-5)-methyltransferase 3-like; PDBTitle: dna methyltransferase 3 like protein (dnmt3l) Resolution 3.30 Å

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		158	.	160	.	.	.	.	.	.	.	.	.			170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure														.	.
Query SS confidence														.	.
Query Sequence		P	G	S	P	L	I	L	E	V	G	C	G	.	.	S	G	A	I	S	L	S	L	L	S	Q	L	P	Q	S	R	V	I	A	V	D	K	R	E	A	A	I	S	L	T	H	E	N	A	Q	R	L	R	L	Q	D	R	I	W	I	I	H	L	D	M	T	S	E	R	S	W	T	H	L	P	W	G	P	M	D	L
Query Conservation														.	.
Alig confidence														.	.								.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	Q	P	V	R	V	L	S	L	F	E	D	I	K	K	E	L	T	S	L	G	.	.	.	.	.	.	.	.	.	F	L	E	S	G	S	D	P	G	Q	L	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	V	V	D	V	T	D	T	V	R	K	D	V	E	E	W	G	P	F	D	L
Template Known Secondary structure											S	S		T							T	T	.	.	.	.	.	.	.	.	.	S	S		S	S		S	S		S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S			T	T									T				S
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.										.	.	210	.	.	.	.	.	.	.	.	.																		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.							290	.	.	.	.		.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.						.
Query SS confidence																																																								.	.	.	.	.	.						.
Query Sequence		I	V	S	N	P	P	Y	V	F	H	Q	D	M	E	Q	L	A	P	E	I	R	S	Y	E	D	P	A	A	L	D	G	G	E	E	G	M	D	I	I	T	H	I	L	A	L	A	P	R	L	L	K	D	S	G	.	.	.	.	.	.	S	I	F	L	E	.	V	D	P	R	H	P	E	L	V	S	S	W	L	Q
Query Conservation																																																								.	.	.	.	.	.						.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.						.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	Y	G	A	T	P	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	H	T	C	D	R	P	P	S	W	Y	L	F	Q	F	H	R	L	L	Q	Y	A	R	P	K	P	G	S	P	G	P	F	F	W	M	F	V	D	N	L	V	L	N	K	E	D	L	D	V	A	S	R
Template Known Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S				S	S																	S			S	S			S										S		S
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		241	.	.	.	.	.	.																					.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	P	D	L	Y	L	N	L	V	A	V	R	R	D	F	C	G	R	P	R	F	L	H	I	R	R	S	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	L	E	M	E	P	V	T	I	P	D	V	H	G	G	S	L	Q	N	A	V	R	V	W	S	N	I	P	A
Template Known Secondary structure			T	T	S										T	T												S	T	T
Template Predicted Secondary structure
Template SS confidence
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions