Job Description Q9Y5R4 Confidence 99.61% Date Tue Apr 3 14:35:09 BST 2012 Rank 111 Aligned Residues 183 % Identity 20% Template c1g38A_ PDB info PDB header:transferase/dna Chain: A: PDB Molecule:modification methylase taqi; PDBTitle: adenine-specific methyltransferase m. taq i/dna complex Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		V	F	I	P	R	P	E	T	E	E	L	V	E	W	V	L	E	E	V	A	Q	R	S	H	A	V	G	S	P	G	S	P	L	I	L	E	V	G	C	G	S	G	A	I	S	L	S	L	L	S	Q	.	L	P	Q	S	R	V	I	A	V	D	K	R	E	A	A	I	S	L	T	H	E	N	A	Q	R	L	R	L
Query Conservation																																																					.
Alig confidence						.	.	.	.											.	.	.	.	.	.	.																											.																							.	.	.	.	.	.
Template Conservation						.	.	.	.											.	.	.	.	.	.	.																																																		.	.	.	.	.	.
Template Sequence		V	E	T	P	.	.	.	.	P	E	V	V	D	F	M	V	S	L	.	.	.	.	.	.	.	A	E	A	P	R	G	G	R	V	L	E	P	A	C	A	H	G	P	F	L	R	A	F	R	E	A	H	G	T	G	Y	R	F	V	G	V	E	I	D	P	K	A	L	D	L	P	P	W	A	.	.	.	.	.	.
Template Known Secondary structure						.	.	.	.									T	T	.	.	.	.	.	.	.					T	T							T		T	T													S		S							S		T	T	T					T	T	S	.	.	.	.	.	.
Template Predicted Secondary structure						.	.	.	.											.	.	.	.	.	.	.																																																		.	.	.	.	.	.
Template SS confidence
		21	.	.	.					.	.	.	.	.	30	.	.	.	.								.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.				.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.
Query SS confidence																																																				.	.	.
Query Sequence		Q	D	R	I	W	I	I	H	L	D	M	T	S	E	R	S	W	T	H	L	P	W	G	P	M	D	L	I	V	S	N	P	P	Y	V	F	H	Q	D	M	E	Q	L	A	P	E	I	R	S	Y	.	.	.	E	D	P	A	A	L	D	G	G	E	E	G	M	D	I	I	T	H	I	L	A	L	A	P	R	L	L
Query Conservation																																																				.	.	.
Alig confidence		.	.	.	.													.	.	.	.	.																														.	.	.
Template Conservation		.	.	.	.													.	.	.	.	.
Template Sequence		.	.	.	.	E	G	I	L	A	D	F	L	L	W	E	P	.	.	.	.	.	G	E	A	F	D	L	I	L	G	N	P	P	Y	G	I	V	G	E	A	S	K	Y	P	I	H	V	F	K	A	V	K	D	L	Y	K	K	A	F	S	T	W	K	G	K	Y	N	L	Y	G	A	F	L	E	K	A	V	R	L	L
Template Known Secondary structure		.	.	.	.					S		G	G	G				.	.	.	.	.	S	S														B	S		T	T	T		S	B															T	T			T	T
Template Predicted Secondary structure		.	.	.	.													.	.	.	.	.
Template SS confidence
						84	.	.	.	.	.	90	.	.	.	.	.						.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		286	.	.	.	290	.	.	.	.	.						.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.
Query SS confidence												.	.	.	.	.
Query Sequence		K	D	S	G	S	I	F	L	E	V	.	.	.	.	.	D	P	R	H	P	E	L	V	S	S	W	L	Q	S	R	P	D	L	Y	L	N	L	V	A	V	R	R	D	F	C	G	R	P	R	F	L	H	I	R	R	S	G	P
Query Conservation												.	.	.	.	.
Alig confidence												.	.	.	.	.
Template Conservation
Template Sequence		K	P	G	G	V	L	V	F	V	V	P	A	T	W	L	V	L	E	D	F	A	L	L	R	E	F	L	A	R	E	G	K	T	S	V	Y	Y	L	G	E	V	F	P	Q	K	K	V	S	A	V	V	I	R	F	Q	K	S	G
Template Known Secondary structure													S	G	G	G	T		G	G	G											S									S		S	T	T												S	S	S
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions