Job Description Q9Y5R4 Confidence 98.95% Date Tue Apr 3 14:35:09 BST 2012 Rank 285 Aligned Residues 196 % Identity 22% Template c1af7A_ PDB info PDB header:methyltransferase Chain: A: PDB Molecule:chemotaxis receptor methyltransferase cher; PDBTitle: cher from salmonella typhimurium Resolution 2.00 Å

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		43	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.							.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure															.													.	.	.	.	.	.
Query SS confidence															.													.	.	.	.	.	.
Query Sequence		E	L	V	S	H	W	T	G	V	F	E	K	R	.	G	I	P	E	A	R	E	S	S	E	Y	I	.	.	.	.	.	.	V	A	H	V	L	G	A	K	T	F	Q	S	L	R	P	A	L	W	T	Q	P	L	T	S	Q	Q	L	Q	C	I	R	E	L	S	S	R	R	L	Q	R	M	P	V	Q	Y	I	L	G
Query Conservation															.													.	.	.	.	.	.
Alig confidence															.													.	.	.	.	.	.																						.														.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																							.														.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	H	F	R	R	I	C	Q	L	I	Y	Q	R	A	G	I	V	L	A	D	H	K	R	D	M	V	Y	N	R	L	V	R	R	L	R	A	L	G	L	D	D	F	G	R	Y	L	S	M	L	E	A	N	Q	.	N	S	A	E	W	Q	A	F	I	N	A	L	T	.	.	.	.	.	.	.	.	.	.	.	T	N
Template Known Secondary structure																					G	G	G																T															T	.	T		T											.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																							.														.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.	80	.	.	.	.	.	.	.	.	.	90												.	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.					.	.	.	.	.	.	.	.	180	.	.					.	.	.	.	.
Predicted Secondary structure																																																										.	.	.	.												.	.	.	.
Query SS confidence																																																										.	.	.	.												.	.	.	.
Query Sequence		E	W	D	F	Q	G	L	S	L	R	M	V	P	P	V	F	I	P	R	P	E	T	E	E	L	V	E	W	V	L	E	E	V	A	Q	R	S	H	A	V	G	S	P	G	S	P	L	I	L	E	V	G	C	G	S	G	.	.	.	.	A	I	S	L	S	L	L	S	Q	L	P	.	.	.	.	Q	S	R	V	I
Query Conservation																																																										.	.	.	.												.	.	.	.
Alig confidence								.	.	.	.	.						.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.																.	.	.	.												.	.	.	.
Template Conservation								.	.	.	.	.						.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.
Template Sequence		L	T	A	F	F	R	.	.	.	.	.	E	A	H	H	F	.	.	.	.	.	.	P	I	L	A	E	H	A	R	R	.	.	.	.	.	.	.	.	.	.	R	H	G	E	Y	R	V	W	S	A	A	A	S	T	G	E	E	P	Y	S	I	A	I	T	L	A	D	A	L	G	M	A	P	G	R	W	K	V	F
Template Known Secondary structure					T	T	T	.	.	.	.	.	T	T	T			.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	S		S							S			T	T	T																S		T	T	S
Template Predicted Secondary structure								.	.	.	.	.						.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.
Template SS confidence
		93	.	.	.	.	.						.	100	.	.	.							.	.	.	.	.	.	110	.	.											.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		188	.	190	.	.	.	.	.	.	.	.	.	200	.																															.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	V	D	K	R	E	A	A	I	S	L	T	H	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	A	Q	R	L	R	L	Q	D	R	I	W	I	I	H	L	D	M	T	S	E	R	S	W	T	H	L	P	W	G	P	M	D	L	I	V
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.
Template Conservation																																																																					.	.	.
Template Sequence		A	S	D	I	D	T	E	V	L	E	K	A	R	S	G	I	Y	R	L	S	E	L	K	T	L	S	P	Q	Q	L	Q	R	Y	F	M	R	G	T	G	P	H	E	G	L	V	R	V	R	Q	E	L	A	N	Y	V	E	F	S	S	V	N	L	L	E	K	Q	Y	.	.	.	N	V	P	G	P	F	D	A	I	F
Template Known Secondary structure					S											T				G	G	G	G	T	T	S														T	T	S		S										T	T								T	T		S	S		.	.	.
Template Predicted Secondary structure																																																																					.	.	.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.				.	220	.	.	.	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	N	P	P	Y	V	F	H	Q	D	M	E	Q	L	A	P	E	I	R	S	Y	E	D	P	A	A	L	D	G	G	E	E	G	M	D	I	I	T	H	I	L	A	L	A	P	R	L	L	K	D	S	G	S	I	F	L	E	V	D	P	R
Query Conservation
Alig confidence			.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		C	.	.	.	.	.	.	R	N	V	M	I	Y	F	D	K	T	T	Q	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	I	L	R	R	F	V	P	L	L	K	P	D	G	L	L	F	A	G	H	S	E	N
Template Known Secondary structure			.	.	.	.	.	.		S	S	G	G	G	S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							G	G	G											T	T
Template Predicted Secondary structure			.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		229							230	.	.	.	.	.	.	.	.	.	240	.	.																			.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions