04/04/2012 18:10:44 : INFO  : Run start: Wed Apr  4 18:10:44 BST 2012
04/04/2012 18:10:44 : INFO  : Initialised job
04/04/2012 18:10:44 : INFO  : Initialised job:
Sequence
>batch____
MELWGRMLWALLSGPGRRGSTRGWAFSSWQPQPPLAGLSSAIELVSHWTGVFEKRGIPEA
RESSEYIVAHVLGAKTFQSLRPALWTQPLTSQQLQCIRELSSRRLQRMPVQYILGEWDFQ
GLSLRMVPPVFIPRPETEELVEWVLEEVAQRSHAVGSPGSPLILEVGCGSGAISLSLLSQ
LPQSRVIAVDKREAAISLTHENAQRLRLQDRIWIIHLDMTSERSWTHLPWGPMDLIVSNP
PYVFHQDMEQLAPEIRSYEDPAALDGGEEGMDIITHILALAPRLLKDSGSIFLEVDPRHP
ELVSSWLQSRPDLYLNLVAVRRDFCGRPRFLHIRRSGP

04/04/2012 18:10:45 : INFO  : Checked sequence
04/04/2012 18:10:45 : INFO  : Finding homologues with PSI-BLAST
04/04/2012 18:10:45 : INFO  : PSI-BLAST 3 iterations
04/04/2012 18:13:05 : INFO  : PSI-BLAST 5 iterations
04/04/2012 18:16:34 : INFO  : Finished PSI-BLAST
04/04/2012 18:16:34 : INFO  : Running Buildali to generate a3m file
04/04/2012 18:33:30 : INFO  : Converting to HMM
04/04/2012 18:33:34 : INFO  : Calibrating HMM
04/04/2012 18:33:43 : INFO  : Searching HMM database
04/04/2012 18:40:03 : INFO  : Finished buildali
04/04/2012 18:40:03 : INFO  : Predicting secondary structure
04/04/2012 18:40:03 : INFO  : Predicted secondary structure (PSI-Pred)
04/04/2012 18:40:03 : INFO  : Predicting Disordered regions
04/04/2012 18:40:03 : INFO  : Predicted Disorder (Disopred)
04/04/2012 18:40:03 : INFO  : Running memsat_svm check
04/04/2012 18:41:47 : INFO  : Globular protein
04/04/2012 18:41:47 : INFO  : Predicted Transmembrane (memsat_svm) ID '384e38b562254505'
04/04/2012 18:41:47 : INFO  : Initialising fold library search
04/04/2012 18:41:47 : INFO  : Initialised search input
04/04/2012 18:41:47 : INFO  : Building Ensemble models
04/04/2012 18:41:47 : INFO  : Building hh.d2b3ta1.model.1.pdb
04/04/2012 18:41:47 : INFO  : Building hh.d1nv8a_.model.2.pdb
04/04/2012 18:41:47 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/384e38b562254505/hh.d1nv8a_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/384e38b562254505/d1nv8a_.2.pdb
04/04/2012 18:41:47 : INFO  : Building d2b3ta1.1.pdb
04/04/2012 18:41:48 : INFO  : Building d1nv8a_.2.pdb
04/04/2012 18:41:48 : INFO  : Building c4dzrA_.3.pdb
04/04/2012 18:41:48 : INFO  : Building c3evzA_.4.pdb
04/04/2012 18:41:49 : INFO  : Building d2h00a1.5.pdb
04/04/2012 18:41:49 : INFO  : Building c3ocjA_.6.pdb
04/04/2012 18:41:49 : INFO  : Building c3q87B_.7.pdb
04/04/2012 18:41:49 : INFO  : Building d2fhpa1.8.pdb
04/04/2012 18:41:50 : INFO  : Building c3p9nA_.9.pdb
04/04/2012 18:41:50 : INFO  : Building c3dmgA_.10.pdb
04/04/2012 18:41:50 : INFO  : Building c2pjdA_.11.pdb
04/04/2012 18:41:50 : INFO  : Building c2ozvA_.12.pdb
04/04/2012 18:41:51 : INFO  : Building d1dusa_.13.pdb
04/04/2012 18:41:51 : INFO  : Building c3lpmA_.14.pdb
04/04/2012 18:41:51 : INFO  : Building c3eeyJ_.15.pdb
04/04/2012 18:41:52 : INFO  : Building c3tm4A_.16.pdb
04/04/2012 18:41:52 : INFO  : Building d2as0a2.17.pdb
04/04/2012 18:41:52 : INFO  : Building d1yzha1.18.pdb
04/04/2012 18:41:53 : INFO  : Building c3grzA_.19.pdb
04/04/2012 18:41:53 : INFO  : Building d2fpoa1.20.pdb
04/04/2012 18:41:55 : INFO  : Finished HH model building
04/04/2012 18:41:55 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
04/04/2012 18:41:59 : INFO  : html domain output complete ID '384e38b562254505'
04/04/2012 19:41:09 : INFO  : Run end  : Wed Apr  4 19:41:09 BST 2012
