Email l.a.kelley@imperial.ac.uk Description A1A4V9 Date Wed Jun 6 09:27:29 BST 2012 Unique Job ID 37d46e1d133e1d1b

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1gksa_ 60.1 22 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 2 c3cu4A_ 51.9 21 PDB header:electron transport Chain: A: PDB Molecule:cytochrome c family protein; PDBTitle: omcf, outer membrance cytochrome f from geobacter2 sulfurreducens 3 c2azqA_ 47.9 16 PDB header:oxidoreductase Chain: A: PDB Molecule:catechol 1,2-dioxygenase; PDBTitle: crystal structure of catechol 1,2-dioxygenase from pseudomonas arvilla2 c-1 4 c2zonG_ 42.4 26 PDB header:oxidoreductase/electron transport Chain: G: PDB Molecule:cytochrome c551; PDBTitle: crystal structure of electron transfer complex of nitrite2 reductase with cytochrome c 5 d2np5a2 31.6 13 Fold:Tetracyclin repressor-like, C-terminal domain Superfamily:Tetracyclin repressor-like, C-terminal domain Family:Tetracyclin repressor-like, C-terminal domain 6 d1a9xa1 23.9 17 Fold:Carbamoyl phosphate synthetase, large subunit connection domain Superfamily:Carbamoyl phosphate synthetase, large subunit connection domain Family:Carbamoyl phosphate synthetase, large subunit connection domain 7 d1xjca_ 23.6 12 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Nitrogenase iron protein-like 8 c2is9A_ 22.6 21 PDB header:transcription Chain: A: PDB Molecule:defective in cullin neddylation protein 1; PDBTitle: structure of yeast dcn-1 9 d1f2ri_ 22.4 23 Fold:beta-Grasp (ubiquitin-like) Superfamily:CAD & PB1 domains Family:CAD domain 10 c3tbiB_ 21.2 28 PDB header:transcription Chain: B: PDB Molecule:dna-directed rna polymerase subunit beta; PDBTitle: crystal structure of t4 gp33 bound to e. coli rnap beta-flap domain 11 d2np5a1 20.4 12 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Tetracyclin repressor-like, N-terminal domain 12 d1dmha_ 16.5 14 Fold:Prealbumin-like Superfamily:Aromatic compound dioxygenase Family:Aromatic compound dioxygenase 13 d1w53a_ 15.3 11 Fold:KaiA/RbsU domain Superfamily:KaiA/RbsU domain Family:Phosphoserine phosphatase RsbU, N-terminal domain 14 d1ui5a1 15.3 13 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Tetracyclin repressor-like, N-terminal domain 15 d1wvec1 15.2 17 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 16 d1lb3a_ 14.0 13 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 17 c1vi0B_ 12.7 13 PDB header:transcription Chain: B: PDB Molecule:transcriptional regulator; PDBTitle: crystal structure of a transcriptional regulator 18 d1qksa1 12.5 17 Fold:Cytochrome c Superfamily:Cytochrome c Family:N-terminal (heme c) domain of cytochrome cd1-nitrite reductase 19 d2d6ya1 11.7 8 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Tetracyclin repressor-like, N-terminal domain 20 d1vi0a1 11.6 10 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Tetracyclin repressor-like, N-terminal domain 21 d3c07a1 not modelled 11.5 10 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Tetracyclin repressor-like, N-terminal domain 22 c2zxyA_ not modelled 11.4 27 PDB header:oxygen binding, transport protein Chain: A: PDB Molecule:cytochrome c552; PDBTitle: crystal structure of cytochrome c555 from aquifex aeolicus 23 d2g3ba1 not modelled 11.2 13 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Tetracyclin repressor-like, N-terminal domain 24 d1puga_ not modelled 11.1 22 Fold:YbaB-like Superfamily:YbaB-like Family:YbaB-like 25 c2bpbB_ not modelled 10.9 38 PDB header:oxidoreductase Chain: B: PDB Molecule:sulfite\:cytochrome c oxidoreductase subunit b; PDBTitle: sulfite dehydrogenase from starkeya novella 26 c3o60A_ not modelled 10.8 18 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:lin0861 protein; PDBTitle: the crystal structure of lin0861 from listeria innocua to 2.8a 27 c2q24A_ not modelled 10.7 20 PDB header:transcription Chain: A: PDB Molecule:putative tetr family transcriptional regulator; PDBTitle: crystal structure of tetr transcriptional regulator sco0520 from2 streptomyces coelicolor 28 d2oi8a1 not modelled 10.5 10 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Tetracyclin repressor-like, N-terminal domain 29 d2id3a1 not modelled 10.3 13 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Tetracyclin repressor-like, N-terminal domain 30 c3cqdB_ not modelled 10.0 13 PDB header:transferase Chain: B: PDB Molecule:6-phosphofructokinase isozyme 2; PDBTitle: structure of the tetrameric inhibited form of2 phosphofructokinase-2 from escherichia coli 31 c3bq3A_ not modelled 10.0 22 PDB header:cell cycle, ligase Chain: A: PDB Molecule:defective in cullin neddylation protein 1; PDBTitle: crystal structure of s. cerevisiae dcn1 32 d2fq4a1 not modelled 9.9 8 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Tetracyclin repressor-like, N-terminal domain 33 c1jn5B_ not modelled 9.7 25 PDB header:transport protein Chain: B: PDB Molecule:tap; PDBTitle: structural basis for the recognition of a nucleoporin fg-2 repeat by the ntf2-like domain of tap-p15 mrna export3 factor 34 d1jt6a1 not modelled 9.7 13 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Tetracyclin repressor-like, N-terminal domain 35 d2id6a1 not modelled 9.7 14 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Tetracyclin repressor-like, N-terminal domain 36 c1zdbA_ not modelled 9.6 21 PDB header:igg binding domain Chain: A: PDB Molecule:mini protein a domain, z38; PDBTitle: phage-selected mini protein a domain, z38, nmr, minimized2 mean structure 37 d2fbqa1 not modelled 9.5 10 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Tetracyclin repressor-like, N-terminal domain 38 d2iu5a1 not modelled 9.3 6 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Tetracyclin repressor-like, N-terminal domain 39 c3f1bA_ not modelled 9.2 8 PDB header:transcription regulator Chain: A: PDB Molecule:tetr-like transcriptional regulator; PDBTitle: the crystal structure of a tetr-like transcriptional regulator from2 rhodococcus sp. rha1. 40 c2kj8A_ not modelled 9.0 11 PDB header:dna binding protein Chain: A: PDB Molecule:putative prophage cps-53 integrase; PDBTitle: nmr structure of fragment 87-196 from the putative phage2 integrase ints of e. coli: northeast structural genomics3 consortium target er652a, psi-2 41 c2eh3A_ not modelled 8.9 19 PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator; PDBTitle: crystal structure of aq_1058, a transcriptional regulator (terr/acrr2 family) from aquifex aeolicus vf5 42 d2hyja1 not modelled 8.7 10 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Tetracyclin repressor-like, N-terminal domain 43 c2dl1A_ not modelled 8.6 14 PDB header:protein transport Chain: A: PDB Molecule:spartin; PDBTitle: solution structure of the mit domain from human spartin 44 c3fiwB_ not modelled 8.4 14 PDB header:transcription regulator Chain: B: PDB Molecule:putative tetr-family transcriptional regulator; PDBTitle: structure of sco0253, a tetr-family transcriptional regulator from2 streptomyces coelicolor 45 c2g7sA_ not modelled 8.4 13 PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator, tetr family; PDBTitle: the crystal structure of transcriptional regulator, tetr family, from2 agrobacterium tumefaciens 46 c2nx4A_ not modelled 8.3 8 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:transcriptional regulator, tetr family protein; PDBTitle: the crystal structure of athe putative tetr-family transcriptional2 regulator rha06780 from rhodococcus sp. rha1. 47 c2jk3A_ not modelled 8.3 10 PDB header:transcription Chain: A: PDB Molecule:hemolysin ii regulatory protein; PDBTitle: crystal structure of the hlyiir mutant protein with2 residues 169-186 substituted by gssgssg linker 48 c2d0sA_ not modelled 8.1 20 PDB header:electron transport Chain: A: PDB Molecule:cytochrome c; PDBTitle: crystal structure of the cytochrome c552 from moderate2 thermophilic bacterium, hydrogenophilus thermoluteolus 49 d1ls9a_ not modelled 8.1 26 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 50 c2gfnA_ not modelled 8.0 5 PDB header:transcription Chain: A: PDB Molecule:hth-type transcriptional regulator pksa related protein; PDBTitle: crystal structure of hth-type transcriptional regulator pksa related2 protein from rhodococcus sp. rha1 51 d1z0xa2 not modelled 8.0 32 Fold:Tetracyclin repressor-like, C-terminal domain Superfamily:Tetracyclin repressor-like, C-terminal domain Family:Tetracyclin repressor-like, C-terminal domain 52 d2ceia1 not modelled 8.0 16 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 53 d1jkgb_ not modelled 7.9 25 Fold:Cystatin-like Superfamily:NTF2-like Family:NTF2-like 54 c2rasB_ not modelled 7.9 13 PDB header:transcription Chain: B: PDB Molecule:transcriptional regulator, tetr family; PDBTitle: crystal structure of a putative tetr/acrr family transcriptional2 regulator (saro_0558) from novosphingobium aromaticivorans dsm at3 1.80 a resolution 55 d1yrnb_ not modelled 7.9 15 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 56 c2wjyA_ not modelled 7.7 41 PDB header:hydrolase Chain: A: PDB Molecule:regulator of nonsense transcripts 1; PDBTitle: crystal structure of the complex between human nonsense2 mediated decay factors upf1 and upf2 orthorhombic form 57 d1cora_ not modelled 7.4 20 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 58 c2o7tA_ not modelled 7.3 20 PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator; PDBTitle: crystal structure of a tetr family transcriptional regulator2 (ncgl1578, cgl1640) from corynebacterium glutamicum at 2.10 a3 resolution 59 c3f0cA_ not modelled 7.3 8 PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator; PDBTitle: crystal structure of transcriptional regulator from cytophaga2 hutchinsonii atcc 33406 60 c3anpD_ not modelled 7.3 13 PDB header:transcription Chain: D: PDB Molecule:transcriptional repressor, tetr family; PDBTitle: crystal structure of thermus thermophilus fadr, a tetr familly2 transcriptional repressor, in complex with lauroyl-coa. 61 c3qbmA_ not modelled 7.0 15 PDB header:transcription regulator Chain: A: PDB Molecule:tetr transcriptional regulator; PDBTitle: crystal structure of a tetr transcriptional regulator (caur_2221) from2 chloroflexus aurantiacus j-10-fl at 1.80 a resolution 62 c1jumB_ not modelled 6.9 12 PDB header:transcription Chain: B: PDB Molecule:hypothetical transcriptional regulator in qaca PDBTitle: crystal structure of the multidrug binding transcriptional2 repressor qacr bound to the natural drug berberine 63 c3m66A_ not modelled 6.9 12 PDB header:transcription Chain: A: PDB Molecule:mterf domain-containing protein 1, mitochondrial; PDBTitle: crystal structure of human mitochondrial transcription termination2 factor 3 64 c2be6F_ not modelled 6.8 38 PDB header:membrane protein Chain: F: PDB Molecule:voltage-dependent l-type calcium channel alpha-1c subunit; PDBTitle: 2.0 a crystal structure of the cav1.2 iq domain-ca/cam complex 65 c2dg8D_ not modelled 6.8 13 PDB header:gene regulation Chain: D: PDB Molecule:putative tetr-family transcriptional regulatory protein; PDBTitle: crystal structure of the putative trasncriptional regulator sco75182 from streptomyces coelicolor a3(2) 66 c2dg7A_ not modelled 6.8 18 PDB header:gene regulation Chain: A: PDB Molecule:putative transcriptional regulator; PDBTitle: crystal structure of the putative transcriptional regulator sco03372 from streptomyces coelicolor a3(2) 67 d2vkea1 not modelled 6.8 17 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Tetracyclin repressor-like, N-terminal domain 68 c3kkcB_ not modelled 6.7 18 PDB header:transcription regulator Chain: B: PDB Molecule:tetr family transcriptional regulator; PDBTitle: the crystal structure of tetr transcriptional regulator from2 streptococcus agalactiae 2603v 69 c2jonA_ not modelled 6.6 32 PDB header:allergen Chain: A: PDB Molecule:beta-1,3-glucanase; PDBTitle: solution structure of the c-terminal domain ole e 9 70 c2uxoB_ not modelled 6.6 15 PDB header:transcription Chain: B: PDB Molecule:hth-type transcriptional regulator ttgr; PDBTitle: ttgr in complex with tetracycline 71 d2vkva1 not modelled 6.5 10 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Tetracyclin repressor-like, N-terminal domain 72 d1zk8a1 not modelled 6.4 10 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Tetracyclin repressor-like, N-terminal domain 73 c3n8uB_ not modelled 6.4 8 PDB header:hydrolase Chain: B: PDB Molecule:imelysin peptidase; PDBTitle: crystal structure of an imelysin peptidase (bacova_03801) from2 bacteroides ovatus at 1.44 a resolution 74 c3iuvA_ not modelled 6.4 15 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized tetr family protein; PDBTitle: the structure of a member of tetr family (sco1917) from2 streptomyces coelicolor a3 75 d2fd5a1 not modelled 6.3 15 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Tetracyclin repressor-like, N-terminal domain 76 d1pbya1 not modelled 6.3 19 Fold:Cytochrome c Superfamily:Cytochrome c Family:Quinohemoprotein amine dehydrogenase A chain, domains 1 and 2 77 d2i10a1 not modelled 6.3 7 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Tetracyclin repressor-like, N-terminal domain 78 d1jmxa1 not modelled 6.3 13 Fold:Cytochrome c Superfamily:Cytochrome c Family:Quinohemoprotein amine dehydrogenase A chain, domains 1 and 2 79 c3g56A_ not modelled 6.2 18 PDB header:dna binding protein Chain: A: PDB Molecule:regulator of macrolide 2'-phosphotransferase i; PDBTitle: structure of the macrolide biosensor protein, mphr(a) 80 d1v7ba1 not modelled 6.2 13 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Tetracyclin repressor-like, N-terminal domain 81 c3hjlA_ not modelled 6.2 14 PDB header:proton transport Chain: A: PDB Molecule:flagellar motor switch protein flig; PDBTitle: the structure of full-length flig from aquifex aeolicus 82 c3cjdB_ not modelled 6.2 20 PDB header:transcription regulator Chain: B: PDB Molecule:transcriptional regulator, tetr family; PDBTitle: crystal structure of putative tetr transcriptional regulator2 (yp_510936.1) from jannaschia sp. ccs1 at 1.79 a resolution 83 c3qkxB_ not modelled 6.1 15 PDB header:transcription regulator Chain: B: PDB Molecule:uncharacterized hth-type transcriptional regulator hi_0893; PDBTitle: crystal structure of a tetr-family transcriptional regulator (hi0893)2 from haemophilus influenzae rd at 2.35 a resolution 84 d1rkta1 not modelled 6.0 13 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Tetracyclin repressor-like, N-terminal domain 85 c2i10A_ not modelled 5.9 8 PDB header:transcription Chain: A: PDB Molecule:putative tetr transcriptional regulator; PDBTitle: putative tetr transcriptional regulator from rhodococcus sp. rha1 86 c2xtsD_ not modelled 5.8 14 PDB header:oxidoreductase/electron transport Chain: D: PDB Molecule:cytochrome; PDBTitle: crystal structure of the sulfane dehydrogenase soxcd from paracoccus2 pantotrophus 87 d351ca_ not modelled 5.8 13 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 88 c2xzlA_ not modelled 5.8 37 PDB header:hydrolase/rna Chain: A: PDB Molecule:atp-dependent helicase nam7; PDBTitle: upf1-rna complex 89 c3b81A_ not modelled 5.8 8 PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, acrr family; PDBTitle: crystal structure of predicted dna-binding transcriptional regulator2 of tetr/acrr family (np_350189.1) from clostridium acetobutylicum at3 2.10 a resolution 90 c2np5A_ not modelled 5.7 12 PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator; PDBTitle: crystal structure of a transcriptional regulator (rha1_ro04179) from2 rhodococcus sp. rha1. 91 c3rd3B_ not modelled 5.6 10 PDB header:transcription Chain: B: PDB Molecule:probable transcriptional regulator; PDBTitle: structure of pseudomonas aeruginosa transcriptional regulator pa2196 92 d2o7ta1 not modelled 5.6 20 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Tetracyclin repressor-like, N-terminal domain 93 d2fx0a1 not modelled 5.5 10 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Tetracyclin repressor-like, N-terminal domain 94 d1fi3a_ not modelled 5.5 27 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 95 c2of7A_ not modelled 5.5 18 PDB header:transcription Chain: A: PDB Molecule:putative tetr-family transcriptional regulator; PDBTitle: structural genomics, the crystal structure of a tetr-family2 transcriptional regulator from streptomyces coelicolor a3 96 d1gdva_ not modelled 5.4 16 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 97 c2x43S_ not modelled 5.4 15 PDB header:membrane protein Chain: S: PDB Molecule:sherp; PDBTitle: structural basis of molecular recognition by sherp at membrane2 surfaces 98 d2g7la1 not modelled 5.3 9 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Tetracyclin repressor-like, N-terminal domain 99 c3dpjB_ not modelled 5.3 13 PDB header:dna binding protein Chain: B: PDB Molecule:transcription regulator, tetr family; PDBTitle: the crystal structure of a tetr transcription regulator2 from silicibacter pomeroyi dss