 |
| Job Description | A1A4V9 | | Confidence | 5.79% | Date | Wed Jun 6 09:27:29 BST 2012 |
| Rank | 88 | Aligned Residues | 27 |
| % Identity | 37% | Template | c2xzlA_ |
| PDB info |
PDB header:hydrolase/rna | Chain: A: PDB Molecule:atp-dependent helicase nam7; |
PDBTitle: upf1-rna complex
|
| Resolution | 2.40 Å |
|
|   |   |
304 | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | |
|
|
320 | . | . | . | . | . | . | . | . | . | 330 |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
S | E | E | R | L | S | S | K | L | T | A | L | E | R | P | F | . |
. |
. |
Q | L | P | P | G | K | G | K | S | K | T |
| Query Conservation |   |
  |
|
|   |
|   |   |
|
|
|   |
|
|   |
|   | . | . | . |   |   |
|   |   |
|   |   |
|
|   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |
|
|   |   |
|
|   |   |   |
|   |   |   |
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|
| Template Sequence |   |
N | S | S | Q | S | N | A | V | S | H | V | L | Q | R | P | L | S | L | I | Q | G | P | P | G | T | G | K | T | V | T |
| Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  |
| S | T | T | S | S |  |  |  |  |
| Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|