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Job DescriptionP00519
Confidence100.00%DateSat Jun 16 10:22:56 BST 2012
Rank11Aligned Residues255
% Identity26%Templatec3pfqA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase c beta type; PDBTitle: crystal structure and allosteric activation of protein kinase c beta2 ii
Resolution4.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   232.......240.........250.........260.........270........ .280.........290... ......300......
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Query Sequence  YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM. . . . EVEEFLKEAAVMKEI. KHPNLVQLLGVCT
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Template Sequence  FNVPVPPLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQ
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TTSSBTTTB
SSS

TTTTT
TT

TTB



B
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   286...290.........300.........310.........320.........330.........340.........350.........360.....
 
   307..310.........320.........330.........340.........350.........360.........370.........380......
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Query Sequence  REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR
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Template Sequence  TMDRLYFVMEYVNGGDLMYHIQQVGR. . FKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCK
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SS


S
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TS




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   412.......420.........430....... ..440.........450.........460.........470.........480.........
 
   387..390.........400.........410.........420.........430.........440.........450.........460......
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Query Sequence  LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPE
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Template Sequence  ENIWDGVTTK. . FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA. GQAPFEGEDEDELFQSIMEHN. VAYPKSMSK
Template Known Secondary structure 


TT

B
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T


BST.SS
SS

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   490......... 500.........510.........520.........530..... ....540.........550...... ...560.....
 
   467..470.........480..... ....490..
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Query Sequence  KVYELMRACWQWNPSDRPS. . . . . FAEIHQA
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Template Sequence  EAVAICKGLMTKHPGKRLGCGPEGERDIKEH
Template Known Secondary structure  S
SSSTT
TT
STTSS
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   567..570.........580.........590.......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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