Return to main results Retrieve Phyre Job Id

Job DescriptionP00519
Confidence99.41%DateSat Jun 16 10:22:56 BST 2012
Rank441Aligned Residues64
% Identity25%Templatec2kymA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:bud emergence protein 1; PDBTitle: solution structure of the bem1p sh3-ci domain from l.elongisporus in2 complex with ste20p peptide
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   63......70.........80.........90.........100..... ....110.........120......
Predicted Secondary structure 
























..















Query SS confidence 










































. .




















Query Sequence  PNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTK. . NGQGWVPSNYITPVNSLEKHS
Query Conservation                                             ..   
  
              
Alig confidence 










































..




















Template Conservation    

 




 
    


   

 
 

      
         
  
 

 



         
Template Sequence  PLFAVTLYEFKAERDDELDVSPGENLSICAHYDYEWFIAKPINRLGGPGLVPVSYVRIIDLMDPAK
Template Known Secondary structure 


S
B


STT


B
TT
TTTSSS
S



GGG
SS
TTT
Template Predicted Secondary structure 






























Template SS confidence 

































































   1........10.........20.........30.........40.........50.........60......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions