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Job DescriptionP00519
Confidence100.00%DateSat Jun 16 10:22:56 BST 2012
Rank111Aligned Residues250
% Identity24%Templatec1zrzA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase c, iota; PDBTitle: crystal structure of the catalytic domain of atypical2 protein kinase c-iota
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   237..240.........250.........260.........270.... .....280.........290.. .......300.........310.
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Query Sequence  MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK. . . . EDTMEVEEFLKEAAVMKE. IKHPNLVQLLGVCTREPPF
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Template Sequence  LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRL
Template Known Secondary structure 

STT
SSTTT

GGG

STTTTTTTSSTTB


B
SS
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   240.........250.........260.........270.........280.........290.........300.........310.........
 
   312.......320.........330.........340.........350.........360.........370.........380.........390.
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Query Sequence  YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD
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Template Sequence  FFVIEYVNGGDLMFHMQR. . QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP
Template Known Secondary structure 


S
BT..TSS

TT
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GGG
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T
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   320.........330....... ..340.........350.........360.........370.........380.........390.......
 
   392.......400.........410.........420.........430.........440.........450.........460.........470.
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Query Sequence  TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYEL
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Template Sequence  GDTTS. . FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMA. GRSPFDQNTEDYLFQVILEKQ. IRIPRSMSVKAASV
Template Known Secondary structure  T

B
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   398.400.. .......410.........420.........430........ .440.........450......... 460.........470...
 
   472.......480..... ....490..
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Query Sequence  MRACWQWNPSDRPS. . . . . . FAEIHQA
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Template Sequence  LKSFLNKDPKERLGCLPQTGFADIQGH
Template Known Secondary structure  T
SSSTTSTTTSTTTS
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   484.....490.........500.........510
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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