Job Description P00519 Confidence 100.00% Date Sat Jun 16 10:22:56 BST 2012 Rank 213 Aligned Residues 253 % Identity 23% Template c1vzoA_ PDB info PDB header:transferase Chain: A: PDB Molecule:ribosomal protein s6 kinase alpha 5; PDBTitle: the structure of the n-terminal kinase domain of msk12 reveals a novel autoinhibitory conformation for a dual3 kinase protein Resolution 1.8 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.				.	.	.	.	.	.	.	.	270	.	.	.	.						.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290		.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.														.	.	.	.	.																	.
Query SS confidence																												.	.	.														.	.	.	.	.																	.
Query Sequence		E	M	E	R	T	D	I	T	M	K	H	K	L	G	G	G	Q	Y	G	E	V	Y	E	G	V	W	.	.	.	K	K	Y	S	L	T	V	A	V	K	T	L	K	.	.	.	.	.	E	D	T	M	E	V	E	E	F	L	K	E	A	A	V	M	.	K	E	I	K	H	P	N	L	V	Q	L	L	G	V	C	T
Query Conservation																												.	.	.														.	.	.	.	.																	.
Alig confidence																												.	.	.														.	.	.	.	.																	.
Template Conservation
Template Sequence		K	V	G	I	E	N	F	E	L	L	K	V	L	G	T	G	A	Y	G	K	V	F	L	V	R	K	I	S	G	H	D	T	G	K	L	Y	A	M	K	V	L	K	K	A	T	I	V	Q	K	A	K	T	T	E	H	T	R	T	E	R	Q	V	L	E	H	I	R	Q	S	P	F	L	V	T	L	H	Y	A	F	Q
Template Known Secondary structure					G	G	G										T	T	T										S	S	T	T	T	T									S									S	S	G	G	G													T		T	T	B
Template Predicted Secondary structure
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	P	P	F	Y	I	I	T	E	F	M	T	Y	G	N	L	L	D	Y	L	R	E	C	N	R	Q	E	V	N	A	V	V	L	L	Y	M	A	T	Q	I	S	S	A	M	E	Y	L	E	K	K	N	F	I	H	R	D	L	A	A	R	N	C	L	V	G	E	N	H	L	V	K	V	A	D	F	G	L	S	R
Query Conservation
Alig confidence																									.	.
Template Conservation																									.	.
Template Sequence		T	E	T	K	L	H	L	I	L	D	Y	I	N	G	G	E	L	F	T	H	L	S	Q	.	.	R	E	R	F	T	E	H	E	V	Q	I	Y	V	G	E	I	V	L	A	L	E	H	L	H	K	L	G	I	I	Y	R	D	I	K	L	E	N	I	L	L	D	S	N	G	H	V	V	L	T	D	F	G	L	S	K
Template Known Secondary structure			T	T											S		B								.	.		S																								T	T								G	G	G					T	T	S					S		S	S
Template Predicted Secondary structure																									.	.
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.			.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.				.	.	.	.	460	.	.	.
Predicted Secondary structure																																																																							.	.	.
Query SS confidence																																																																							.	.	.
Query Sequence		L	M	T	G	D	T	Y	T	A	H	A	G	A	K	F	P	I	K	W	T	A	P	E	S	L	A	Y	N	K	F	S	I	K	S	D	V	W	A	F	G	V	L	L	W	E	I	A	T	Y	G	M	S	P	Y	P	G	I	D	L	S	Q	V	Y	E	L	L	E	K	D	.	.	.	Y	R	M	E	R	P	E	G
Query Conservation																																																																							.	.	.
Alig confidence													.																																					.																					.	.	.
Template Conservation													.																																					.
Template Sequence		E	F	V	A	D	E	T	E	R	A	Y	.	D	F	C	G	T	I	E	Y	M	A	P	D	I	V	R	G	G	D	D	K	A	V	D	W	W	S	L	G	V	L	M	Y	E	L	L	T	.	G	A	S	P	F	T	V	D	G	E	K	N	S	Q	A	E	I	S	R	R	I	L	K	S	E	P	P	Y	P	Q	E
Template Known Secondary structure					G	G	G	G	G	G	G		.	G	G	G	S			T	T							T	T				T																	.	S	S		T	T	S		T	T	S																				T	T
Template Predicted Secondary structure													.																																					.
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.		.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
		464	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.						.	.	.	.	.	490	.	.
Predicted Secondary structure																							.	.	.	.	.
Query SS confidence																							.	.	.	.	.
Query Sequence		C	P	E	K	V	Y	E	L	M	R	A	C	W	Q	W	N	P	S	D	R	P	.	.	.	.	.	S	F	A	E	I	H	Q	A
Query Conservation																							.	.	.	.	.
Alig confidence																							.	.	.	.	.
Template Conservation
Template Sequence		M	S	A	L	A	K	D	L	I	Q	R	L	L	M	K	D	P	K	K	R	L	G	C	G	P	R	D	A	D	E	I	K	E	H
Template Known Secondary structure		S												T		S	S	G	G	G	S	T	T	S	S	T	T	T						T	S
Template Predicted Secondary structure
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions