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Job DescriptionP00519
Confidence100.00%DateSat Jun 16 10:22:56 BST 2012
Rank5Aligned Residues428
% Identity40%Templatec1k9aB_
PDB info PDB header:transferaseChain: B: PDB Molecule:carboxyl-terminal src kinase; PDBTitle: crystal structure analysis of full-length carboxyl-terminal2 src kinase at 2.5 a resolution
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   58.60.........70.........80.........90.........100....... ..110.........120. ........130
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Query Sequence  PSENDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNG. QGWVPSNYITPVNS. . . . . . LEKHSWYHG
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Template Sequence  ASWPSGTECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGIIPANYVQKREGVKAGTKLSLMPWFHG
Template Known Secondary structure  S


TT
SS
B

SSTTB

B
TT

SSTT
TTS
GGG





SSSS
TTB

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   6...10.........20.........30.........40.........50.........60.........70.........80.....
 
   131........140.........150.........160.........170.........180.........190.........200.........210
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Query Sequence  PVSRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSESRFNTLAELVHHHSTVADGLI
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Template Sequence  KITREQAERLLYPPETGLFLVRESTNYPGDYTLCVSCEGKVEHYRIMY. HASKLSIDEEVYFENLMQLVEHYTTDADGLC
Template Known Secondary structure  S

T
S

TT

SSSTT
TT.TTSSSSS
BSS

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   86...90.........100.........110.........120.........130... ......140.........150.........160....
 
   211........220.........230.........240.........250.........260.........270.........280.........290
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Query Sequence  TTLHYPAPKRNKPTVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM
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Template Sequence  TRLIKPKVMEGTVAAQDE. FYRSGWALNMKELKLLQTIGKGEFGDVMLGDYR. . GNKVAVKCIKND. ATAQAFLAEASVM
Template Known Secondary structure  S


SB


SS
.TT
B

GGG

TTT..TSS
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   165....170.........180.. .......190.........200.........210..... ....220....... ..230.........240
 
   291........300......... 310.........320.........330.........340.........350.........360.........
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Query Sequence  KEIKHPNLVQLLGVCTREP. PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNC
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Template Sequence  TQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNV
Template Known Secondary structure  TT


TTB


SSS



TT
B
TTT

TT
B
S


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   241........250.........260.........270.........280.........290.........300.........310.........320
 
   370.........380.........390.........400.........410.........420.........430.........440.........
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Query Sequence  LVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY
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Template Sequence  LVSEDNVAKVSDFGLTK. . . . . . . . . . EAGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV
Template Known Secondary structure 
TT




TT
B..........





TTTS
TTT


TTT

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TTT
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   321........330....... ..340.........350.........360.........370.........380.........390
 
   450.........460.........470.........480.........490.........500
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Query Sequence  ELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES
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Template Sequence  PRVEKGYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTHE
Template Known Secondary structure  TTT





TT

T
SSGGGS

T
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   397..400.........410.........420.........430.........440.......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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