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Job DescriptionP43405
Confidence100.00%DateFri May 25 09:37:32 BST 2012
Rank39Aligned Residues269
% Identity38%Templated2psqa1
SCOP infoProtein kinase-like (PK-like) Protein kinase-like (PK-like) Protein kinases, catalytic subunit
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   351........360.........370.........380.........390... ......400.........410.........420.....
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Query Sequence  PYADPEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMK. . . . . KVVKTVAVKILKNEANDPALKDELLAEANVMQ
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Template Sequence  PEDPKWEFPRDKLTL. . . . . . . . GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD. ATEKDLSDLVSEMEMMK
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TTTB

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   469470.........480... ......490.........500.........510.........520.. .......530.........
 
   426. ..430......... 440.........450.........460.... .....470.........480.........490........
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Query Sequence  QL. DNPYIVRMIGIC. EAESWMLVMEMAELGPLNKYLQQNR. . . . . HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAAR
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Template Sequence  MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAAR
Template Known Secondary structure  S


TTB


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   540.........550.........560.........570.........580.........590.........600.........610.........
 
   499500.........510.........520.........530.........540.........550.........560.........570........
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Query Sequence  NVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG
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Template Sequence  NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL. PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV
Template Known Secondary structure  G
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SS
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   631........640.........650.........660..... ....670.........680.........690.........700.........
 
   579580.........590.........600.........610.........620.........
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Query Sequence  SEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY
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Template Sequence  EELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI
Template Known Secondary structure  GGTT





TTS
T
SSGGGS

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   710.........720.........730.........740.........750.........760
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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