Return to main results Retrieve Phyre Job Id

Job DescriptionP43405
Confidence100.00%DateFri May 25 09:37:32 BST 2012
Rank131Aligned Residues251
% Identity22%Templated1rdqe_
SCOP infoProtein kinase-like (PK-like) Protein kinase-like (PK-like) Protein kinases, catalytic subunit
Resolution1.26

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   371........380.........390.........400........ .410.........420.........430.........440... .....
Predicted Secondary structure 
















.









.
Query SS confidence 





































.


































.




Query Sequence  TLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA. NDPALKDELLAEANVMQQLDNPYIVRMIGICEAES. WMLVM
Query Conservation        

 
 

 
             



 
    .           
   
  
 




 
 
      .  

 
Alig confidence 























..











.


































.




Template Conservation 
     

 
 

 

 
    

..  



 
                

 

  
 




                
Template Sequence  FDRIKTLGTGSFGRVMLVKHKESG. . NHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM
Template Known Secondary structure 
SS
TTT
..
TT
TT


TTB


SS
Template Predicted Secondary structure 






..























Template SS confidence 















































































   43......50.........60...... ...70.........80.........90.........100.........110.........120
 
   449450.........460.........470.........480.........490.........500.........510.........520........
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  EMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA
Query Conservation 
    
 
   
                

  

 


   






  



      

 




            
Alig confidence 














































































.
Template Conservation                               
   
  
     
                  
 



            .
Template Sequence  EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWLCG.
Template Known Secondary structure 

TT
B



TT



SGGG
TTS



TT

SS
B


S.
Template Predicted Secondary structure 



















































.
Template SS confidence 















































































   121........130.........140.........150.........160.........170.........180.........190.........
 
   529530.........540.........550.........560.........570.........580.........590.........600........
Predicted Secondary structure 


































Query SS confidence 















































































Query Sequence  QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLC
Query Conservation        
    


       
  




 

 
 
  
 
  
            
        
   
     

  
Alig confidence  ......
































.




















.

















Template Conservation  ......                   













.
  

           
    .       
    


   
Template Sequence  . . . . . . TPEALAPEIILSKGYNKAVDWWALGVLIYEMAA. GYPPFFADQPIQIYEKIVSGK. VRFPSHFSSDLKDLLRNL
Template Known Secondary structure  ......
GGG

TT

B
T.SS
SS

SS

.



TT

Template Predicted Secondary structure  ......




















.











.







Template SS confidence 















































































   201........210.........220.........230... ......240.........250.... .....260.........270..
 
   609610...... ...620.........630.....
Predicted Secondary structure 




.....



Query SS confidence 







. . . . .


















Query Sequence  WTYDVENR. . . . . PGFAAVELRLRNYYYDVVN
Query Conservation      
  
.....

   
   
         
Alig confidence 







.....





...









Template Conservation 
  

  
      
  

...
 



    
Template Sequence  LQVDLTKRFGNLKNGVNDI. . . KNHKWFATTD
Template Known Secondary structure  S
S
TTT
TTSSTTTT...TSGGGTT

Template Predicted Secondary structure 










...






Template SS confidence 































   273......280.........290. ........300.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions