Return to main results Retrieve Phyre Job Id

Job DescriptionP43405
Confidence100.00%DateFri May 25 09:37:32 BST 2012
Rank47Aligned Residues275
% Identity31%Templated1p4oa_
SCOP infoProtein kinase-like (PK-like) Protein kinase-like (PK-like) Protein kinases, catalytic subunit
Resolution1.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   352.......360.........370.........380.........390. ........400.........410.........420........
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Query Sequence  YADPEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQ. . . MKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD
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Template Sequence  FSAADVYVPDEWEVAREKITM. SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA. ASMRERIEFLNEASVMKEFN
Template Known Secondary structure  S


S




TTB

GGG.
SSSTT

TT.S
GGG

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   951........960.........970. ........980.........990.........1000........ .1010.........1020........
 
   429430......... 440.........450.........460.... .....470.........480.........490.......
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Query Sequence  NPYIVRMIGIC. EAESWMLVMEMAELGPLNKYLQQNR. . . . . . . . . . HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAA
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Template Sequence  CHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAA
Template Known Secondary structure 
TTB


SSSS


TT
B
TT




TT


S

SG
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   10291030.........1040.........1050.........1060.........1070.........1080.........1090.........1100........
 
   498.500.........510.........520.........530.........540.........550.........560.........570.......
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Query Sequence  RNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK
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Template Sequence  RNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV. RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS
Template Known Secondary structure  GG
TT



TT


GGGGGG
GGGSS
G.GG





TS

TTTTS
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   11091110.........1120.........1130.........1140...... ...1150.........1160.........1170.........1180.......
 
   578.580.........590.........600.........610.........620.........
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Query Sequence  GSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY
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Template Sequence  NEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE
Template Known Secondary structure  TT





TT

T
SSGGGS

GGG
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   1188.1190.........1200.........1210.........1220.........1230.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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