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Job DescriptionP43405
Confidence100.00%DateFri May 25 09:37:32 BST 2012
Rank29Aligned Residues246
% Identity20%Templatec3soaA_
PDB info PDB header:transferase/transferase inhibitorChain: A: PDB Molecule:calcium/calmodulin-dependent protein kinase type ii subunit PDBTitle: full-length human camkii
Resolution3.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   371........380.........390.........400.........410.........420.........430.........440... ......
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Query Sequence  TLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAES. WMLVME
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Template Sequence  YQLFEELGKGSVVRRCV. . . . KVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFD
Template Known Secondary structure 

....TTTTS
S


BTTB


SS
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   13......20......... 30.........40.........50.........60.........70.........80........
 
   450.........460.........470.........480.........490.........500....... ..510.........520......
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Query Sequence  MAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHY. . . AKISDFGLSKALRADENYY
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Template Sequence  LVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAW
Template Known Secondary structure 

B

B
S


TT
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SSTTSBSSTT




SS
B


TT

B
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   91........100.........110.........120.........130.........140.........150.........160.........170
 
   527..530.........540.........550.........560.........570.........580.........590 .........600...
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Query Sequence  KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGER. . . MGCPAGCPREMYD
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Template Sequence  FGFAG. . . TPGYLSPEVLRKDPYGKPVDLWACGVILYILLV. GYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKD
Template Known Secondary structure 

S
S...
GGG

TT

B
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   171.... ....180.........190.........200........ .210.........220.........230.........240......
 
   604.....610.........620....
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Query Sequence  LMNLCWTYDVENRPGFAAVEL
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Template Sequence  LINKMLTINPSKRITAAEALK
Template Known Secondary structure  S
SSTTTS

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   247..250.........260.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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